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  5. Zm00001e034238_P001

Zm00001e034238_P001


Description : transcription factor (ARID)


Gene families : OG0002894 (Archaeplastida) Phylogenetic Tree(s): OG0002894_tree ,
OG_05_0002890 (LandPlants) Phylogenetic Tree(s): OG_05_0002890_tree ,
OG_06_0002777 (SeedPlants) Phylogenetic Tree(s): OG_06_0002777_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e034238_P001
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00129p00111730 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.ARID... 0.03 Archaeplastida
LOC_Os09g26390.1 No alias transcription factor (ARID) 0.02 Archaeplastida
Mp2g17360.1 No alias transcription factor (ARID) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0016151 nickel cation binding IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0019627 urea metabolic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043419 urea catabolic process IEP Neighborhood
BP GO:0043605 cellular amide catabolic process IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0071941 nitrogen cycle metabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001606 ARID_dom 582 679
No external refs found!