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  5. Zm00001e034257_P001

Zm00001e034257_P001


Description : Probable polygalacturonase OS=Vitis vinifera (sp|a7pzl3|pglr_vitvi : 328.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 84.0)


Gene families : OG0000349 (Archaeplastida) Phylogenetic Tree(s): OG0000349_tree ,
OG_05_0004328 (LandPlants) Phylogenetic Tree(s): OG_05_0004328_tree ,
OG_06_0003745 (SeedPlants) Phylogenetic Tree(s): OG_06_0003745_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e034257_P001
Cluster HCCA: Cluster_335

Target Alias Description ECC score Gene Family Method Actions
AT1G19170 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
GSVIVT01028057001 No alias Probable polygalacturonase OS=Vitis vinifera 0.03 Archaeplastida
GSVIVT01035089001 No alias Probable polygalacturonase OS=Vitis vinifera 0.03 Archaeplastida
Gb_10631 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida
Gb_23151 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida
Gb_39001 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida
LOC_Os09g26800.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.04 Archaeplastida
LOC_Os11g43750.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.04 Archaeplastida
MA_10430135g0020 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida
Pp3c19_14240V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Solyc01g094970.4.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 Archaeplastida
Solyc05g049980.3.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.04 Archaeplastida
Solyc07g042160.3.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.08 Archaeplastida
Zm00001e023760_P001 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 186 473
No external refs found!