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  5. Zm00001e034397_P001

Zm00001e034397_P001


Description : pre-mRNA splicing factor (SPF45/RBM17)


Gene families : OG0007004 (Archaeplastida) Phylogenetic Tree(s): OG0007004_tree ,
OG_05_0008356 (LandPlants) Phylogenetic Tree(s): OG_05_0008356_tree ,
OG_06_0008708 (SeedPlants) Phylogenetic Tree(s): OG_06_0008708_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e034397_P001
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
Gb_32096 No alias pre-mRNA splicing factor (SPF45/RBM17) 0.03 Archaeplastida
Mp2g10810.1 No alias pre-mRNA splicing factor (SPF45/RBM17) 0.04 Archaeplastida
Pp3c2_18610V3.1 No alias D111/G-patch domain-containing protein 0.02 Archaeplastida
Solyc02g069790.3.1 No alias pre-mRNA splicing factor (SPF45/RBM17) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR000467 G_patch_dom 213 252
No external refs found!