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  5. Zm00001e034469_P001

Zm00001e034469_P001


Description : ubiquitin protein ligase (XERICO)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000175 (LandPlants) Phylogenetic Tree(s): OG_05_0000175_tree ,
OG_06_0000116 (SeedPlants) Phylogenetic Tree(s): OG_06_0000116_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e034469_P001
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT1G49220 No alias RING/U-box superfamily protein 0.04 Archaeplastida
GSVIVT01013145001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.08 Archaeplastida
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
LOC_Os01g20930.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g55110.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os02g46340.1 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.09 Archaeplastida
LOC_Os04g37740.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os05g36310.1 No alias RING-H2 finger protein ATL77 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os06g45580.1 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os07g06560.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os08g06090.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g39450.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10021g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_17390g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_6931619g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_94359g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Pp3c21_17280V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Solyc12g005020.2.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e025397_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 99 143
No external refs found!