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  5. Zm00001e034624_P005

Zm00001e034624_P005


Description : component beta type-6 of 26S proteasome


Gene families : OG0004085 (Archaeplastida) Phylogenetic Tree(s): OG0004085_tree ,
OG_05_0004491 (LandPlants) Phylogenetic Tree(s): OG_05_0004491_tree ,
OG_06_0005401 (SeedPlants) Phylogenetic Tree(s): OG_06_0005401_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e034624_P005
Cluster HCCA: Cluster_340

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00220020 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.03 Archaeplastida
AT3G60820 PBF1 N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.05 Archaeplastida
Cpa|evm.model.tig00001339.5 No alias Protein degradation.26S proteasome.20S core... 0.04 Archaeplastida
Cre26.g756797 No alias Protein degradation.26S proteasome.20S core... 0.13 Archaeplastida
GSVIVT01027613001 No alias Protein degradation.26S proteasome.20S core... 0.03 Archaeplastida
LOC_Os09g32800.1 No alias component beta type-6 of 26S proteasome 0.07 Archaeplastida
Mp1g12450.1 No alias component beta type-6 of 26S proteasome 0.05 Archaeplastida
Solyc02g084920.3.1 No alias component beta type-6 of 26S proteasome 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
MF GO:0019781 NEDD8 activating enzyme activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0045116 protein neddylation IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
CC GO:0070531 BRCA1-A complex IEP Neighborhood
CC GO:0070552 BRISC complex IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 11 199
No external refs found!