AT3G49950


Description : GRAS family transcription factor


Gene families : OG0005728 (Archaeplastida) Phylogenetic Tree(s): OG0005728_tree ,
OG_05_0003877 (LandPlants) Phylogenetic Tree(s): OG_05_0003877_tree ,
OG_06_0003463 (SeedPlants) Phylogenetic Tree(s): OG_06_0003463_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G49950
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00159690 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.03 Archaeplastida
AMTR_s00137p00078020 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.02 Archaeplastida
GSVIVT01000142001 No alias Scarecrow-like protein 32 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc02g092570.1.1 No alias transcription factor (GRAS) 0.04 Archaeplastida
Zm00001e010677_P001 No alias transcription factor (GRAS) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
Type GO Term Name Evidence Source
BP GO:0000038 very long-chain fatty acid metabolic process IEP Neighborhood
CC GO:0000793 condensed chromosome IEP Neighborhood
BP GO:0001676 long-chain fatty acid metabolic process IEP Neighborhood
BP GO:0001708 cell fate specification IEP Neighborhood
BP GO:0002213 defense response to insect IEP Neighborhood
BP GO:0003002 regionalization IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0007267 cell-cell signaling IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
BP GO:0008356 asymmetric cell division IEP Neighborhood
BP GO:0009798 axis specification IEP Neighborhood
BP GO:0009913 epidermal cell differentiation IEP Neighborhood
BP GO:0009946 proximal/distal axis specification IEP Neighborhood
BP GO:0009957 epidermal cell fate specification IEP Neighborhood
BP GO:0010052 guard cell differentiation IEP Neighborhood
BP GO:0010154 fruit development IEP Neighborhood
BP GO:0010158 abaxial cell fate specification IEP Neighborhood
BP GO:0010338 leaf formation IEP Neighborhood
BP GO:0010374 stomatal complex development IEP Neighborhood
BP GO:0023052 signaling IEP Neighborhood
BP GO:0030154 cell differentiation IEP Neighborhood
BP GO:0030497 fatty acid elongation IEP Neighborhood
BP GO:0030855 epithelial cell differentiation IEP Neighborhood
BP GO:0032880 regulation of protein localization IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0045168 cell-cell signaling involved in cell fate commitment IEP Neighborhood
BP GO:0048629 trichome patterning IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
BP GO:0090558 plant epidermis development IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
BP GO:2000038 regulation of stomatal complex development IEP Neighborhood
BP GO:2000122 negative regulation of stomatal complex development IEP Neighborhood
InterPro domains Description Start Stop
IPR005202 TF_GRAS 27 407
No external refs found!