AT3G49970


Description : Phototropic-responsive NPH3 family protein


Gene families : OG0000044 (Archaeplastida) Phylogenetic Tree(s): OG0000044_tree ,
OG_05_0000480 (LandPlants) Phylogenetic Tree(s): OG_05_0000480_tree ,
OG_06_0000628 (SeedPlants) Phylogenetic Tree(s): OG_06_0000628_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G49970
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AT2G14820 NPY2 Phototropic-responsive NPH3 family protein 0.05 Archaeplastida
AT5G10250 DOT3 Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT5G48130 No alias Phototropic-responsive NPH3 family protein 0.05 Archaeplastida
GSVIVT01002274001 No alias BTB/POZ domain-containing protein DOT3 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01003773001 No alias BTB/POZ domain-containing protein At5g66560... 0.03 Archaeplastida
GSVIVT01010983001 No alias BTB/POZ domain-containing protein At1g03010... 0.03 Archaeplastida
GSVIVT01024542001 No alias Root phototropism protein 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_00052 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os02g35970.1 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.03 Archaeplastida
LOC_Os03g10800.2 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os03g22600.1 No alias BTB/POZ domain-containing protein At1g03010... 0.05 Archaeplastida
LOC_Os04g57800.1 No alias component BPH1 of CUL3-BTB E3 ubiquitin ligase complex 0.03 Archaeplastida
LOC_Os05g08530.1 No alias Root phototropism protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os06g08550.1 No alias BTB/POZ domain-containing protein NPY1 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os07g39530.1 No alias BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida
LOC_Os11g02610.1 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g02540.1 No alias BTB/POZ domain-containing protein At3g08570... 0.03 Archaeplastida
MA_10429476g0010 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.03 Archaeplastida
MA_10592g0020 No alias BTB/POZ domain-containing protein At5g48130... 0.04 Archaeplastida
MA_135496g0010 No alias Root phototropism protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_178653g0010 No alias BTB/POZ domain-containing protein At3g22104... 0.02 Archaeplastida
MA_52004g0010 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.07 Archaeplastida
MA_90165g0010 No alias Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.02 Archaeplastida
MA_9526427g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp2g13430.1 No alias BTB/POZ domain-containing protein At5g48130... 0.05 Archaeplastida
Mp7g03290.1 No alias BTB/POZ domain-containing protein At1g30440... 0.04 Archaeplastida
Pp3c12_21560V3.1 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
Pp3c13_16380V3.1 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
Pp3c3_37660V3.1 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
Smo231529 No alias BTB/POZ domain-containing protein At5g48800... 0.02 Archaeplastida
Smo422107 No alias BTB/POZ domain-containing protein At5g03250... 0.03 Archaeplastida
Solyc02g064720.3.1 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.03 Archaeplastida
Solyc07g043130.3.1 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc09g061250.4.1 No alias BTB/POZ domain-containing protein At5g48800... 0.03 Archaeplastida
Solyc10g047530.2.1 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.06 Archaeplastida
Solyc10g049660.2.1 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e003063_P004 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e011959_P001 No alias BTB/POZ domain-containing protein At5g66560... 0.03 Archaeplastida
Zm00001e014998_P003 No alias BTB/POZ domain-containing protein At1g67900... 0.04 Archaeplastida
Zm00001e019629_P002 No alias BTB/POZ domain-containing protein At5g03250... 0.04 Archaeplastida
Zm00001e033674_P003 No alias BTB/POZ domain-containing protein At5g47800... 0.02 Archaeplastida
Zm00001e038762_P001 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004871 obsolete signal transducer activity ISS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0009416 response to light stimulus ISS Interproscan
Type GO Term Name Evidence Source
BP GO:0000038 very long-chain fatty acid metabolic process IEP Neighborhood
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005496 steroid binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008142 oxysterol binding IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008327 methyl-CpG binding IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009070 serine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009593 detection of chemical stimulus IEP Neighborhood
BP GO:0009699 phenylpropanoid biosynthetic process IEP Neighborhood
BP GO:0009704 de-etiolation IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009720 detection of hormone stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009726 detection of endogenous stimulus IEP Neighborhood
BP GO:0009727 detection of ethylene stimulus IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009739 response to gibberellin IEP Neighborhood
BP GO:0009740 gibberellic acid mediated signaling pathway IEP Neighborhood
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010030 positive regulation of seed germination IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010104 regulation of ethylene-activated signaling pathway IEP Neighborhood
BP GO:0010105 negative regulation of ethylene-activated signaling pathway IEP Neighborhood
BP GO:0010315 auxin efflux IEP Neighborhood
BP GO:0010345 suberin biosynthetic process IEP Neighborhood
BP GO:0010476 gibberellin mediated signaling pathway IEP Neighborhood
BP GO:0010500 transmitting tissue development IEP Neighborhood
BP GO:0010540 basipetal auxin transport IEP Neighborhood
BP GO:0010541 acropetal auxin transport IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0010928 regulation of auxin mediated signaling pathway IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
BP GO:0016925 protein sumoylation IEP Neighborhood
BP GO:0019344 cysteine biosynthetic process IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0030497 fatty acid elongation IEP Neighborhood
BP GO:0031539 positive regulation of anthocyanin metabolic process IEP Neighborhood
MF GO:0032934 sterol binding IEP Neighborhood
MF GO:0042562 hormone binding IEP Neighborhood
BP GO:0042761 very long-chain fatty acid biosynthetic process IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0046620 regulation of organ growth IEP Neighborhood
BP GO:0046622 positive regulation of organ growth IEP Neighborhood
BP GO:0048438 floral whorl development IEP Neighborhood
BP GO:0048449 floral organ formation IEP Neighborhood
BP GO:0048462 carpel formation IEP Neighborhood
BP GO:0048467 gynoecium development IEP Neighborhood
BP GO:0048569 post-embryonic animal organ development IEP Neighborhood
BP GO:0048582 positive regulation of post-embryonic development IEP Neighborhood
BP GO:0048639 positive regulation of developmental growth IEP Neighborhood
MF GO:0050062 long-chain-fatty-acyl-CoA reductase activity IEP Neighborhood
BP GO:0051094 positive regulation of developmental process IEP Neighborhood
BP GO:0051240 positive regulation of multicellular organismal process IEP Neighborhood
MF GO:0051740 ethylene binding IEP Neighborhood
BP GO:0070297 regulation of phosphorelay signal transduction system IEP Neighborhood
BP GO:0070298 negative regulation of phosphorelay signal transduction system IEP Neighborhood
BP GO:0070542 response to fatty acid IEP Neighborhood
BP GO:0071396 cellular response to lipid IEP Neighborhood
BP GO:0071398 cellular response to fatty acid IEP Neighborhood
BP GO:0071731 response to nitric oxide IEP Neighborhood
BP GO:0071732 cellular response to nitric oxide IEP Neighborhood
MF GO:0072328 alkene binding IEP Neighborhood
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP Neighborhood
BP GO:0080126 ovary septum development IEP Neighborhood
BP GO:0097366 response to bronchodilator IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
BP GO:1902170 cellular response to reactive nitrogen species IEP Neighborhood
BP GO:1905328 plant septum development IEP Neighborhood
InterPro domains Description Start Stop
IPR027356 NPH3_dom 149 394
IPR000210 BTB/POZ_dom 3 80
No external refs found!