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  5. Zm00001e034903_P001

Zm00001e034903_P001


Description : Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana (sp|q9sjz3|pp169_arath : 451.0)


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree ,
OG_06_0000000 (SeedPlants) Phylogenetic Tree(s): OG_06_0000000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e034903_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00035580 No alias Pentatricopeptide repeat-containing protein At5g44230... 0.02 Archaeplastida
AMTR_s00099p00097640 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.02 Archaeplastida
GSVIVT01025607001 No alias Pentatricopeptide repeat-containing protein At5g42450,... 0.02 Archaeplastida
Gb_17091 No alias RNA editing factor (OTP82) 0.02 Archaeplastida
LOC_Os01g11470.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g08680.1 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.02 Archaeplastida
LOC_Os10g30760.1 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.03 Archaeplastida
LOC_Os11g10740.1 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.02 Archaeplastida
MA_7550g0010 No alias Pentatricopeptide repeat-containing protein At4g25270,... 0.03 Archaeplastida
Zm00001e039180_P001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 414 442
IPR002885 Pentatricopeptide_repeat 386 413
IPR002885 Pentatricopeptide_repeat 486 510
IPR002885 Pentatricopeptide_repeat 77 124
IPR002885 Pentatricopeptide_repeat 178 225
IPR002885 Pentatricopeptide_repeat 311 357
No external refs found!