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Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37440.2); Has 70 Blast hits to 70 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene families : OG0004042 (Archaeplastida) Phylogenetic Tree(s): OG0004042_tree ,
OG_05_0003273 (LandPlants) Phylogenetic Tree(s): OG_05_0003273_tree ,
OG_06_0003656 (SeedPlants) Phylogenetic Tree(s): OG_06_0003656_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT3G50040 | |
| Cluster | HCCA: Cluster_39 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000028 | ribosomal small subunit assembly | IEP | Neighborhood |
| BP | GO:0000447 | endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Neighborhood |
| BP | GO:0000461 | endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Neighborhood |
| BP | GO:0000469 | cleavage involved in rRNA processing | IEP | Neighborhood |
| BP | GO:0000478 | endonucleolytic cleavage involved in rRNA processing | IEP | Neighborhood |
| BP | GO:0000479 | endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Neighborhood |
| BP | GO:0000741 | karyogamy | IEP | Neighborhood |
| BP | GO:0006275 | regulation of DNA replication | IEP | Neighborhood |
| BP | GO:0006405 | RNA export from nucleus | IEP | Neighborhood |
| BP | GO:0006407 | rRNA export from nucleus | IEP | Neighborhood |
| BP | GO:0006606 | protein import into nucleus | IEP | Neighborhood |
| BP | GO:0007059 | chromosome segregation | IEP | Neighborhood |
| BP | GO:0007129 | synapsis | IEP | Neighborhood |
| BP | GO:0007131 | reciprocal meiotic recombination | IEP | Neighborhood |
| BP | GO:0009560 | embryo sac egg cell differentiation | IEP | Neighborhood |
| BP | GO:0010082 | regulation of root meristem growth | IEP | Neighborhood |
| BP | GO:0010197 | polar nucleus fusion | IEP | Neighborhood |
| BP | GO:0010564 | regulation of cell cycle process | IEP | Neighborhood |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Neighborhood |
| CC | GO:0015935 | small ribosomal subunit | IEP | Neighborhood |
| BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
| BP | GO:0022414 | reproductive process | IEP | Neighborhood |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Neighborhood |
| CC | GO:0022627 | cytosolic small ribosomal subunit | IEP | Neighborhood |
| CC | GO:0030684 | preribosome | IEP | Neighborhood |
| CC | GO:0030686 | 90S preribosome | IEP | Neighborhood |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Neighborhood |
| BP | GO:0031125 | rRNA 3'-end processing | IEP | Neighborhood |
| BP | GO:0032875 | regulation of DNA endoreduplication | IEP | Neighborhood |
| BP | GO:0034504 | protein localization to nucleus | IEP | Neighborhood |
| BP | GO:0035825 | homologous recombination | IEP | Neighborhood |
| BP | GO:0042138 | meiotic DNA double-strand break formation | IEP | Neighborhood |
| BP | GO:0043628 | ncRNA 3'-end processing | IEP | Neighborhood |
| BP | GO:0045132 | meiotic chromosome segregation | IEP | Neighborhood |
| BP | GO:0048284 | organelle fusion | IEP | Neighborhood |
| BP | GO:0048449 | floral organ formation | IEP | Neighborhood |
| BP | GO:0050657 | nucleic acid transport | IEP | Neighborhood |
| BP | GO:0050658 | RNA transport | IEP | Neighborhood |
| BP | GO:0050793 | regulation of developmental process | IEP | Neighborhood |
| BP | GO:0051029 | rRNA transport | IEP | Neighborhood |
| BP | GO:0051168 | nuclear export | IEP | Neighborhood |
| BP | GO:0051170 | import into nucleus | IEP | Neighborhood |
| BP | GO:0051236 | establishment of RNA localization | IEP | Neighborhood |
| BP | GO:0051239 | regulation of multicellular organismal process | IEP | Neighborhood |
| BP | GO:0051302 | regulation of cell division | IEP | Neighborhood |
| BP | GO:0061982 | meiosis I cell cycle process | IEP | Neighborhood |
| BP | GO:0070192 | chromosome organization involved in meiotic cell cycle | IEP | Neighborhood |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| BP | GO:0090305 | nucleic acid phosphodiester bond hydrolysis | IEP | Neighborhood |
| BP | GO:0090329 | regulation of DNA-dependent DNA replication | IEP | Neighborhood |
| BP | GO:0090501 | RNA phosphodiester bond hydrolysis | IEP | Neighborhood |
| BP | GO:0090502 | RNA phosphodiester bond hydrolysis, endonucleolytic | IEP | Neighborhood |
| BP | GO:0097064 | ncRNA export from nucleus | IEP | Neighborhood |
| BP | GO:0098813 | nuclear chromosome segregation | IEP | Neighborhood |
| BP | GO:2000026 | regulation of multicellular organismal development | IEP | Neighborhood |
| BP | GO:2000280 | regulation of root development | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |