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  5. Zm00001e035060_P002

Zm00001e035060_P002


Description : transcription factor (SBP)


Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree ,
OG_06_0000075 (SeedPlants) Phylogenetic Tree(s): OG_06_0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e035060_P002
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
AMTR_s00019p00235390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
AMTR_s00106p00142470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.05 Archaeplastida
AMTR_s00106p00142740 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00106p00144050 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.05 Archaeplastida
AT1G02065 SPL8 squamosa promoter binding protein-like 8 0.06 Archaeplastida
AT1G27370 SPL10 squamosa promoter binding protein-like 10 0.04 Archaeplastida
AT2G33810 SPL3 squamosa promoter binding protein-like 3 0.02 Archaeplastida
AT3G15270 SPL5 squamosa promoter binding protein-like 5 0.03 Archaeplastida
AT5G43270 SPL2 squamosa promoter binding protein-like 2 0.03 Archaeplastida
GSVIVT01008556001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
GSVIVT01018205001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
GSVIVT01033519001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
Gb_15605 No alias transcription factor (SBP) 0.02 Archaeplastida
Gb_27198 No alias transcription factor (SBP) 0.02 Archaeplastida
Gb_38013 No alias transcription factor (SBP) 0.03 Archaeplastida
Gb_38014 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g46580.1 No alias transcription factor (SBP) 0.08 Archaeplastida
LOC_Os04g56170.1 No alias transcription factor (SBP) 0.04 Archaeplastida
LOC_Os07g32170.1 No alias transcription factor (SBP) 0.06 Archaeplastida
LOC_Os08g39890.1 No alias transcription factor (SBP) 0.08 Archaeplastida
LOC_Os09g31438.1 No alias transcription factor (SBP) 0.07 Archaeplastida
Smo79699 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
Solyc05g015840.3.1 No alias transcription factor (SBP) 0.03 Archaeplastida
Solyc10g009080.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc10g018780.3.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Zm00001e013198_P001 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e013795_P002 No alias transcription factor (SBP) 0.05 Archaeplastida
Zm00001e021962_P003 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e025110_P001 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e025234_P001 No alias transcription factor (SBP) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004860 protein kinase inhibitor activity IEP Neighborhood
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0007050 cell cycle arrest IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019210 kinase inhibitor activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
InterPro domains Description Start Stop
IPR004333 SBP_dom 163 236
No external refs found!