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  5. AT3G50160

AT3G50160


Description : Plant protein of unknown function (DUF247)


Gene families : OG0000139 (Archaeplastida) Phylogenetic Tree(s): OG0000139_tree ,
OG_05_0000052 (LandPlants) Phylogenetic Tree(s): OG_05_0000052_tree ,
OG_06_0000062 (SeedPlants) Phylogenetic Tree(s): OG_06_0000062_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G50160
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00075010 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00016p00254630 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00023p00152840 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00023p00152880 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00023p00153750 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00023p00153970 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00023p00170960 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00023p00171820 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00066p00120870 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G65985 No alias Plant protein of unknown function (DUF247) 0.07 Archaeplastida
AT2G28580 No alias Plant protein of unknown function (DUF247) 0.05 Archaeplastida
AT2G44930 No alias Plant protein of unknown function (DUF247) 0.06 Archaeplastida
AT3G44710 No alias Plant protein of unknown function (DUF247) 0.07 Archaeplastida
AT3G47210 No alias Plant protein of unknown function (DUF247) 0.04 Archaeplastida
AT3G50130 No alias Plant protein of unknown function (DUF247) 0.05 Archaeplastida
AT5G22550 No alias Plant protein of unknown function (DUF247) 0.1 Archaeplastida
GSVIVT01014791001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01014793001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_12420 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 Archaeplastida
Gb_20052 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_36108 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.05 Archaeplastida
Gb_36109 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g21670.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g38120.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g38190.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os08g25030.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os08g42570.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g33394.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_9718623g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc02g093020.3.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc05g006690.3.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc05g041500.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc10g079230.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g099300.1.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e024850_P001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0004805 trehalose-phosphatase activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005217 intracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005249 voltage-gated potassium channel activity IEP Neighborhood
MF GO:0005267 potassium channel activity IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006874 cellular calcium ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0009672 auxin:proton symporter activity IEP Neighborhood
BP GO:0009960 endosperm development IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015271 outward rectifier potassium channel activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0019203 carbohydrate phosphatase activity IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0022843 voltage-gated cation channel activity IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
MF GO:0030551 cyclic nucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0045036 protein targeting to chloroplast IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055074 calcium ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0072503 cellular divalent inorganic cation homeostasis IEP Neighborhood
BP GO:0072507 divalent inorganic cation homeostasis IEP Neighborhood
BP GO:0072596 establishment of protein localization to chloroplast IEP Neighborhood
BP GO:0072598 protein localization to chloroplast IEP Neighborhood
MF GO:0080161 auxin transmembrane transporter activity IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
InterPro domains Description Start Stop
IPR004158 DUF247_pln 106 483
No external refs found!