1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e035213_P001

Zm00001e035213_P001


Description : component eIF4G of eIF4F mRNA unwinding complex


Gene families : OG0000590 (Archaeplastida) Phylogenetic Tree(s): OG0000590_tree ,
OG_05_0002292 (LandPlants) Phylogenetic Tree(s): OG_05_0002292_tree ,
OG_06_0002271 (SeedPlants) Phylogenetic Tree(s): OG_06_0002271_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e035213_P001
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00140630 evm_27.TU.AmTr_v1... Protein biosynthesis.translation initiation.mRNA... 0.07 Archaeplastida
AT3G60240 CUM2, EIF4G No description available 0.08 Archaeplastida
Cpa|evm.model.tig00000076.101 No alias Eukaryotic translation initiation factor 4G OS=Triticum aestivum 0.03 Archaeplastida
Gb_05240 No alias component eIF4G of eIF4F mRNA unwinding complex 0.06 Archaeplastida
Gb_34673 No alias component eIF-iso4G of eIF-iso4F unwinding complex 0.04 Archaeplastida
LOC_Os02g39840.1 No alias component eIF-iso4G of eIF-iso4F unwinding complex 0.02 Archaeplastida
Mp7g16900.1 No alias component eIF4G of eIF4F mRNA unwinding complex 0.06 Archaeplastida
Pp3c14_20340V3.1 No alias MIF4G domain-containing protein / MA3 domain-containing protein 0.03 Archaeplastida
Pp3c3_36480V3.1 No alias eukaryotic translation initiation factor 4G 0.09 Archaeplastida
Pp3c3_37250V3.1 No alias eukaryotic translation initiation factor 4G 0.11 Archaeplastida
Smo437322 No alias Protein biosynthesis.translation initiation.mRNA... 0.04 Archaeplastida
Solyc01g088700.4.1 No alias component eIF4G of eIF4F mRNA unwinding complex 0.14 Archaeplastida
Solyc07g005810.3.1 No alias component eIF-iso4G of eIF-iso4F unwinding complex 0.02 Archaeplastida
Solyc12g009960.2.1 No alias component eIF-iso4G of eIF-iso4F unwinding complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0005049 nuclear export signal receptor activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017069 snRNA binding IEP Neighborhood
MF GO:0017070 U6 snRNA binding IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0030623 U5 snRNA binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003891 Initiation_fac_eIF4g_MI 1635 1748
IPR003890 MIF4G-like_typ-3 1209 1432
No external refs found!