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Description : transcription factor (bHLH)
Gene families : OG0000092 (Archaeplastida) Phylogenetic Tree(s): OG0000092_tree ,
OG_05_0000040 (LandPlants) Phylogenetic Tree(s): OG_05_0000040_tree ,
OG_06_0000031 (SeedPlants) Phylogenetic Tree(s): OG_06_0000031_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e035422_P001 | |
| Cluster | HCCA: Cluster_28 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00008p00265010 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
| AT1G09530 | PIF3, POC1, PAP3 | phytochrome interacting factor 3 | 0.05 | Archaeplastida | |
| AT1G27740 | RSL4 | root hair defective 6-like 4 | 0.05 | Archaeplastida | |
| AT2G14760 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| AT2G43010 | SRL2, PIF4, AtPIF4 | phytochrome interacting factor 4 | 0.02 | Archaeplastida | |
| AT2G46970 | PIL1 | phytochrome interacting factor 3-like 1 | 0.04 | Archaeplastida | |
| AT3G21330 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | Archaeplastida | |
| AT3G50330 | HEC2 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | Archaeplastida | |
| AT3G59060 | PIL6, PIF5 | phytochrome interacting factor 3-like 6 | 0.03 | Archaeplastida | |
| AT4G33880 | RSL2 | ROOT HAIR DEFECTIVE 6-LIKE 2 | 0.03 | Archaeplastida | |
| AT5G67060 | HEC1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | Archaeplastida | |
| AT5G67110 | ALC | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| GSVIVT01018164001 | No alias | Transcription factor UNE10 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
| GSVIVT01018165001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | Archaeplastida | |
| GSVIVT01028238001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | Archaeplastida | |
| GSVIVT01028516001 | No alias | External stimuli response.light.red/far red light.PIF... | 0.02 | Archaeplastida | |
| LOC_Os01g02110.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| LOC_Os03g10770.1 | No alias | transcription factor (bHLH) | 0.17 | Archaeplastida | |
| LOC_Os03g42100.1 | No alias | transcription factor (bHLH) | 0.07 | Archaeplastida | |
| LOC_Os07g05010.2 | No alias | transcription factor (bHLH). PIF red/far-red light... | 0.04 | Archaeplastida | |
| LOC_Os07g39940.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| LOC_Os09g28210.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| LOC_Os11g41640.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| LOC_Os12g39850.1 | No alias | transcription factor (bHLH) | 0.16 | Archaeplastida | |
| MA_100071g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_10156436g0010 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| MA_26114g0010 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| MA_83500g0010 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| MA_88831g0010 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Mp3g23300.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Mp6g21470.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Pp3c10_19020V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| Pp3c16_21590V3.1 | No alias | ROOT HAIR DEFECTIVE 6-LIKE 2 | 0.03 | Archaeplastida | |
| Pp3c25_13740V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| Pp3c3_28970V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| Pp3c3_8460V3.1 | No alias | ROOT HAIR DEFECTIVE 6-LIKE 2 | 0.02 | Archaeplastida | |
| Smo409967 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
| Smo413232 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | Archaeplastida | |
| Solyc01g107140.3.1 | No alias | transcription factor (bHLH) | 0.11 | Archaeplastida | |
| Solyc02g091440.2.1 | No alias | transcription factor (bHLH) | 0.08 | Archaeplastida | |
| Solyc03g115540.2.1 | No alias | transcription factor (bHLH) | 0.01 | Archaeplastida | |
| Solyc04g077960.1.1 | No alias | transcription factor (bHLH) | 0.11 | Archaeplastida | |
| Solyc11g005780.3.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Solyc12g088380.1.1 | No alias | transcription factor (bHLH) | 0.1 | Archaeplastida | |
| Zm00001e017430_P001 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| Zm00001e018003_P001 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Zm00001e027758_P002 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Zm00001e032280_P001 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Zm00001e040380_P002 | No alias | transcription factor (bHLH). PIF red/far-red light... | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0004601 | peroxidase activity | IEP | Neighborhood |
| MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005576 | extracellular region | IEP | Neighborhood |
| CC | GO:0005618 | cell wall | IEP | Neighborhood |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | Neighborhood |
| BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
| BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006950 | response to stress | IEP | Neighborhood |
| BP | GO:0006979 | response to oxidative stress | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Neighborhood |
| MF | GO:0009055 | electron transfer activity | IEP | Neighborhood |
| BP | GO:0009250 | glucan biosynthetic process | IEP | Neighborhood |
| MF | GO:0015267 | channel activity | IEP | Neighborhood |
| CC | GO:0016020 | membrane | IEP | Neighborhood |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Neighborhood |
| MF | GO:0016209 | antioxidant activity | IEP | Neighborhood |
| MF | GO:0016301 | kinase activity | IEP | Neighborhood |
| BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | Neighborhood |
| MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016746 | transferase activity, transferring acyl groups | IEP | Neighborhood |
| MF | GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups | IEP | Neighborhood |
| MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Neighborhood |
| MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Neighborhood |
| MF | GO:0016759 | cellulose synthase activity | IEP | Neighborhood |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Neighborhood |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | Neighborhood |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
| MF | GO:0016887 | ATPase activity | IEP | Neighborhood |
| MF | GO:0020037 | heme binding | IEP | Neighborhood |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0030243 | cellulose metabolic process | IEP | Neighborhood |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | Neighborhood |
| CC | GO:0030312 | external encapsulating structure | IEP | Neighborhood |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Neighborhood |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Neighborhood |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Neighborhood |
| BP | GO:0036211 | protein modification process | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
| BP | GO:0044042 | glucan metabolic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Neighborhood |
| MF | GO:0046527 | glucosyltransferase activity | IEP | Neighborhood |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| CC | GO:0048046 | apoplast | IEP | Neighborhood |
| MF | GO:0050664 | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | IEP | Neighborhood |
| BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | Neighborhood |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 219 | 259 |
| No external refs found! |