AT3G50510 (LBD28)

Aliases : LBD28

Description : LOB domain-containing protein 28

Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0000043 (SeedPlants) Phylogenetic Tree(s): OG_06_0000043_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G50510
Cluster	HCCA: Cluster_73

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00169p00042500	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AS2/LOB...	0.04	Archaeplastida
AT1G06280	LBD2	LOB domain-containing protein 2	0.04	Archaeplastida
AT1G65620	AS2	Lateral organ boundaries (LOB) domain family protein	0.03	Archaeplastida
AT1G72980	LBD7	LOB domain-containing protein 7	0.05	Archaeplastida
AT3G47870	LBD27, SCP	LOB domain-containing protein 27	0.08	Archaeplastida
AT5G63090	LOB	Lateral organ boundaries (LOB) domain family protein	0.05	Archaeplastida
GSVIVT01018486001	No alias	RNA biosynthesis.transcriptional activation.AS2/LOB...	0.04	Archaeplastida
GSVIVT01032592001	No alias	RNA biosynthesis.transcriptional activation.AS2/LOB...	0.04	Archaeplastida
Gb_40767	No alias	transcription factor (AS2/LOB)	0.03	Archaeplastida
LOC_Os01g66590.2	No alias	transcription factor (AS2/LOB)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004565	beta-galactosidase activity	IEP	Neighborhood
MF	GO:0005315	inorganic phosphate transmembrane transporter activity	IEP	Neighborhood
BP	GO:0006071	glycerol metabolic process	IEP	Neighborhood
MF	GO:0008889	glycerophosphodiester phosphodiesterase activity	IEP	Neighborhood
MF	GO:0015925	galactosidase activity	IEP	Neighborhood
BP	GO:0019400	alditol metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004883	LOB	12	109

External Links

No external refs found!