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  5. Zm00001e035495_P001

Zm00001e035495_P001


Description : transcriptional co-repressor (AFP/NINJA)


Gene families : OG0000721 (Archaeplastida) Phylogenetic Tree(s): OG0000721_tree ,
OG_05_0000424 (LandPlants) Phylogenetic Tree(s): OG_05_0000424_tree ,
OG_06_0000404 (SeedPlants) Phylogenetic Tree(s): OG_06_0000404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e035495_P001
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
AT1G69260 AFP1 ABI five binding protein 0.06 Archaeplastida
AT3G29575 AFP3 ABI five binding protein 3 0.07 Archaeplastida
GSVIVT01003927001 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.09 Archaeplastida
GSVIVT01008104001 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.02 Archaeplastida
GSVIVT01012225001 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.05 Archaeplastida
LOC_Os03g11550.1 No alias transcriptional co-repressor (AFP/NINJA) 0.05 Archaeplastida
LOC_Os03g30570.1 No alias transcriptional co-repressor (AFP/NINJA) 0.07 Archaeplastida
LOC_Os07g41160.1 No alias transcriptional co-repressor (AFP/NINJA) 0.05 Archaeplastida
MA_16384g0010 No alias transcriptional co-repressor (AFP/NINJA) 0.05 Archaeplastida
MA_2575g0010 No alias transcriptional co-repressor (AFP/NINJA) 0.05 Archaeplastida
Solyc02g030633.1.1 No alias transcriptional co-repressor (AFP/NINJA) 0.04 Archaeplastida
Solyc04g005380.3.1 No alias transcriptional co-repressor (AFP/NINJA) 0.1 Archaeplastida
Zm00001e038719_P006 No alias transcriptional co-repressor (AFP/NINJA) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012463 Ninja_motif 31 71
IPR032310 NINJA_B 100 145
IPR032308 Jas 231 298
No external refs found!