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  5. Zm00001e035517_P001

Zm00001e035517_P001


Description : component NF-YB of NF-Y transcription factor complex


Gene families : OG0000142 (Archaeplastida) Phylogenetic Tree(s): OG0000142_tree ,
OG_05_0000244 (LandPlants) Phylogenetic Tree(s): OG_05_0000244_tree ,
OG_06_0000165 (SeedPlants) Phylogenetic Tree(s): OG_06_0000165_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e035517_P001
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00202310 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NF-Y... 0.02 Archaeplastida
AT2G47810 NF-YB5 nuclear factor Y, subunit B5 0.02 Archaeplastida
AT5G47670 NF-YB6, L1L nuclear factor Y, subunit B6 0.06 Archaeplastida
Gb_07866 No alias component NF-YB of NF-Y transcription factor complex 0.04 Archaeplastida
Gb_41265 No alias component NF-YB of NF-Y transcription factor complex 0.04 Archaeplastida
LOC_Os01g70880.1 No alias component NF-YB of NF-Y transcription factor complex 0.04 Archaeplastida
LOC_Os05g38820.4 No alias component NF-YB of NF-Y transcription factor complex 0.03 Archaeplastida
LOC_Os07g41580.1 No alias component NF-YB of NF-Y transcription factor complex 0.05 Archaeplastida
Smo69246 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.02 Archaeplastida
Solyc01g067130.4.1 No alias component NF-YB of NF-Y transcription factor complex 0.05 Archaeplastida
Solyc04g049910.4.1 No alias component NF-YB of NF-Y transcription factor complex 0.04 Archaeplastida
Zm00001e010728_P001 No alias component NF-YB of NF-Y transcription factor complex 0.06 Archaeplastida
Zm00001e015700_P001 No alias component NF-YB of NF-Y transcription factor complex 0.05 Archaeplastida
Zm00001e027268_P001 No alias component NF-YB of NF-Y transcription factor complex 0.05 Archaeplastida
Zm00001e036848_P001 No alias component NF-YB of NF-Y transcription factor complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 25 89
No external refs found!