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  5. Zm00001e035768_P001

Zm00001e035768_P001


Description : component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0008026 (Archaeplastida) Phylogenetic Tree(s): OG0008026_tree ,
OG_05_0008888 (LandPlants) Phylogenetic Tree(s): OG_05_0008888_tree ,
OG_06_0010036 (SeedPlants) Phylogenetic Tree(s): OG_06_0010036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e035768_P001
Cluster HCCA: Cluster_304

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01000659001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Solyc11g005590.1.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 27 64
No external refs found!