Description : Pentatricopeptide repeat-containing protein At4g32430, mitochondrial OS=Arabidopsis thaliana (sp|q84ma3|pp345_arath : 583.0)
Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0010905 (LandPlants) Phylogenetic Tree(s): OG_05_0010905_tree ,
OG_06_0010138 (SeedPlants) Phylogenetic Tree(s): OG_06_0010138_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e035817_P001 | |
Cluster | HCCA: Cluster_86 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00160280 | No alias | Pentatricopeptide repeat-containing protein At2g29760,... | 0.03 | Archaeplastida | |
GSVIVT01000072001 | No alias | Pentatricopeptide repeat-containing protein At3g05340... | 0.05 | Archaeplastida | |
GSVIVT01007974001 | No alias | Pentatricopeptide repeat-containing protein At5g61400... | 0.03 | Archaeplastida | |
GSVIVT01011455001 | No alias | Pentatricopeptide repeat-containing protein At2g20540... | 0.02 | Archaeplastida | |
GSVIVT01011501001 | No alias | Pentatricopeptide repeat-containing protein At5g39350... | 0.05 | Archaeplastida | |
GSVIVT01021023001 | No alias | RNA processing.organelle machineries.RNA... | 0.03 | Archaeplastida | |
GSVIVT01024493001 | No alias | Pentatricopeptide repeat-containing protein At4g39952,... | 0.03 | Archaeplastida | |
GSVIVT01025389001 | No alias | Pentatricopeptide repeat-containing protein At5g48910... | 0.08 | Archaeplastida | |
GSVIVT01026141001 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.03 | Archaeplastida | |
GSVIVT01027839001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
GSVIVT01030054001 | No alias | Pentatricopeptide repeat-containing protein At5g48910... | 0.04 | Archaeplastida | |
GSVIVT01031265001 | No alias | Pentatricopeptide repeat-containing protein At5g66520... | 0.05 | Archaeplastida | |
GSVIVT01031266001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.07 | Archaeplastida | |
GSVIVT01033004001 | No alias | Pentatricopeptide repeat-containing protein At3g26782,... | 0.04 | Archaeplastida | |
GSVIVT01034655001 | No alias | Pentatricopeptide repeat-containing protein At5g04780,... | 0.07 | Archaeplastida | |
GSVIVT01035618001 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.03 | Archaeplastida | |
GSVIVT01035837001 | No alias | Pentatricopeptide repeat-containing protein At4g21065... | 0.05 | Archaeplastida | |
GSVIVT01036010001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | Archaeplastida | |
GSVIVT01036943001 | No alias | Pentatricopeptide repeat-containing protein At5g48910... | 0.04 | Archaeplastida | |
GSVIVT01037332001 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.03 | Archaeplastida | |
Gb_18166 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | Archaeplastida | |
Gb_33411 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | Archaeplastida | |
LOC_Os01g11470.1 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida | |
LOC_Os01g41650.1 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | Archaeplastida | |
LOC_Os02g49830.1 | No alias | Pentatricopeptide repeat-containing protein At3g22690... | 0.05 | Archaeplastida | |
MA_81105g0010 | No alias | RNA editing factor (OTP82) | 0.06 | Archaeplastida | |
Smo100621 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | Archaeplastida | |
Smo121365 | No alias | Pentatricopeptide repeat-containing protein At3g02330,... | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Neighborhood |
MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
CC | GO:0005839 | proteasome core complex | IEP | Neighborhood |
BP | GO:0006412 | translation | IEP | Neighborhood |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Neighborhood |
BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
MF | GO:0008047 | enzyme activator activity | IEP | Neighborhood |
MF | GO:0009055 | electron transfer activity | IEP | Neighborhood |
BP | GO:0009057 | macromolecule catabolic process | IEP | Neighborhood |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
MF | GO:0019208 | phosphatase regulator activity | IEP | Neighborhood |
MF | GO:0019211 | phosphatase activator activity | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Neighborhood |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Neighborhood |
CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Neighborhood |
BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Neighborhood |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | Neighborhood |
MF | GO:0051540 | metal cluster binding | IEP | Neighborhood |
BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Neighborhood |
MF | GO:0070003 | threonine-type peptidase activity | IEP | Neighborhood |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
No external refs found! |