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AT3G50860


Description : Clathrin adaptor complex small chain family protein


Gene families : OG0000560 (Archaeplastida) Phylogenetic Tree(s): OG0000560_tree ,
OG_05_0007850 (LandPlants) Phylogenetic Tree(s): OG_05_0007850_tree ,
OG_06_0008696 (SeedPlants) Phylogenetic Tree(s): OG_06_0008696_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G50860
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00186170 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 Archaeplastida
Gb_36359 No alias AP-1 complex subunit sigma-2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os08g30480.1 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.03 Archaeplastida
Mp1g27490.1 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.02 Archaeplastida
Pp3c26_15020V3.1 No alias associated protein 19 0.03 Archaeplastida
Pp3c9_6760V3.1 No alias SNARE-like superfamily protein 0.02 Archaeplastida
Solyc02g085240.4.1 No alias small subunit sigma of AP-3 Golgi to vacuole cargo... 0.03 Archaeplastida
Solyc05g026130.3.1 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport ISS Interproscan
CC GO:0030125 clathrin vesicle coat ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0004343 glucosamine 6-phosphate N-acetyltransferase activity IEP Neighborhood
MF GO:0004723 calcium-dependent protein serine/threonine phosphatase activity IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
MF GO:0005527 macrolide binding IEP Neighborhood
MF GO:0005528 FK506 binding IEP Neighborhood
CC GO:0005778 peroxisomal membrane IEP Neighborhood
CC GO:0005779 integral component of peroxisomal membrane IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005794 Golgi apparatus IEP Neighborhood
CC GO:0005838 proteasome regulatory particle IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006044 N-acetylglucosamine metabolic process IEP Neighborhood
MF GO:0008430 selenium binding IEP Neighborhood
MF GO:0010427 abscisic acid binding IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016559 peroxisome fission IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0019840 isoprenoid binding IEP Neighborhood
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
CC GO:0031903 microbody membrane IEP Neighborhood
MF GO:0033293 monocarboxylic acid binding IEP Neighborhood
MF GO:0042562 hormone binding IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
MF GO:0043178 alcohol binding IEP Neighborhood
CC GO:0044438 microbody part IEP Neighborhood
CC GO:0044439 peroxisomal part IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 1 146
No external refs found!