Zm00001e036060_P001

Description : E3 ubiquitin ligase (PUB)

Gene families : OG0003551 (Archaeplastida) Phylogenetic Tree(s): OG0003551_tree ,
OG_05_0002338 (LandPlants) Phylogenetic Tree(s): OG_05_0002338_tree ,
OG_06_0001993 (SeedPlants) Phylogenetic Tree(s): OG_06_0001993_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e036060_P001
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00240140	evm_27.TU.AmTr_v1...	U-box domain-containing protein 4 OS=Arabidopsis thaliana	0.02	Archaeplastida
Gb_13006	No alias	E3 ubiquitin ligase (PUB)	0.04	Archaeplastida
LOC_Os06g13080.1	No alias	E3 ubiquitin ligase (PUB)	0.03	Archaeplastida
LOC_Os06g13090.1	No alias	E3 ubiquitin ligase (PUB)	0.06	Archaeplastida
LOC_Os09g21740.1	No alias	E3 ubiquitin ligase (PUB)	0.05	Archaeplastida
MA_252170g0010	No alias	E3 ubiquitin ligase (PUB)	0.02	Archaeplastida
Smo90666	No alias	U-box domain-containing protein 38 OS=Arabidopsis thaliana	0.03	Archaeplastida
Zm00001e034032_P001	No alias	no hits & (original description: none)	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006777	Mo-molybdopterin cofactor biosynthetic process	IEP	Neighborhood
MF	GO:0015035	protein disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Neighborhood
BP	GO:0019720	Mo-molybdopterin cofactor metabolic process	IEP	Neighborhood
BP	GO:0043545	molybdopterin cofactor metabolic process	IEP	Neighborhood
BP	GO:0051189	prosthetic group metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	86	159

External Links

No external refs found!