1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e036127_P002

Zm00001e036127_P002


Description : transcription factor (MADS/AGL)


Gene families : OG0000011 (Archaeplastida) Phylogenetic Tree(s): OG0000011_tree ,
OG_05_0000008 (LandPlants) Phylogenetic Tree(s): OG_05_0000008_tree ,
OG_06_0000013 (SeedPlants) Phylogenetic Tree(s): OG_06_0000013_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e036127_P002
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00214260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
AT1G22130 AGL104 AGAMOUS-like 104 0.03 Archaeplastida
AT1G77980 AGL66 AGAMOUS-like 66 0.08 Archaeplastida
AT3G57230 AGL16 AGAMOUS-like 16 0.03 Archaeplastida
AT3G57390 AGL18 AGAMOUS-like 18 0.02 Archaeplastida
AT5G60910 AGL8, FUL AGAMOUS-like 8 0.03 Archaeplastida
Cpa|evm.model.tig00000944.9 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
GSVIVT01008140001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01009393001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
GSVIVT01010221001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01018839001 No alias Floral homeotic protein DEFICIENS OS=Antirrhinum majus 0.03 Archaeplastida
GSVIVT01022182001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.05 Archaeplastida
Gb_12581 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
LOC_Os06g11970.1 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
LOC_Os08g38590.1 No alias transcription factor (MADS/AGL) 0.08 Archaeplastida
MA_10289256g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
MA_141872g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
MA_1767g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
MA_333471g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
MA_7858089g0010 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
MA_95674g0010 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
MA_9771g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Mp4g11760.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Pp3c1_39760V3.1 No alias AGAMOUS-like 66 0.02 Archaeplastida
Pp3c4_3820V3.1 No alias AGAMOUS-like 66 0.02 Archaeplastida
Solyc03g114830.3.1 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
Solyc05g015750.3.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc05g051825.1.1 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Zm00001e032487_P001 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
MF GO:0036442 proton-exporting ATPase activity IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
No external refs found!