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  5. Zm00001e036233_P001

Zm00001e036233_P001


Description : component RPS17 of SSU proteome


Gene families : OG0002265 (Archaeplastida) Phylogenetic Tree(s): OG0002265_tree ,
OG_05_0002018 (LandPlants) Phylogenetic Tree(s): OG_05_0002018_tree ,
OG_06_0002044 (SeedPlants) Phylogenetic Tree(s): OG_06_0002044_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e036233_P001
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00243530 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 Archaeplastida
AT2G04390 No alias Ribosomal S17 family protein 0.03 Archaeplastida
AT2G05220 No alias Ribosomal S17 family protein 0.1 Archaeplastida
AT3G10610 No alias Ribosomal S17 family protein 0.14 Archaeplastida
AT5G04800 No alias Ribosomal S17 family protein 0.12 Archaeplastida
Cre12.g498250 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 Archaeplastida
GSVIVT01034653001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 Archaeplastida
LOC_Os03g01900.1 No alias component RPS17 of SSU proteome 0.07 Archaeplastida
LOC_Os10g27190.1 No alias component RPS17 of SSU proteome 0.13 Archaeplastida
MA_184894g0010 No alias component RPS17 of SSU proteome 0.08 Archaeplastida
MA_217540g0010 No alias component RPS17 of SSU proteome 0.03 Archaeplastida
Mp8g18950.1 No alias component RPS17 of SSU proteome 0.1 Archaeplastida
Pp3c11_2530V3.1 No alias Ribosomal S17 family protein 0.07 Archaeplastida
Pp3c11_2540V3.1 No alias Ribosomal S17 family protein 0.14 Archaeplastida
Pp3c2_34780V3.1 No alias Ribosomal S17 family protein 0.13 Archaeplastida
Pp3c7_21070V3.1 No alias Ribosomal S17 family protein 0.05 Archaeplastida
Pp3c7_21140V3.1 No alias Ribosomal S17 family protein 0.11 Archaeplastida
Smo270936 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 Archaeplastida
Solyc05g055230.2.1 No alias component RPS17 of SSU proteome 0.12 Archaeplastida
Solyc10g150146.1.1 No alias component RPS17 of SSU proteome 0.12 Archaeplastida
Solyc11g006690.1.1 No alias component RPS17 of SSU proteome 0.14 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
CC GO:0061617 MICOS complex IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001210 Ribosomal_S17e 1 119
No external refs found!