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  5. Zm00001e036248_P001

Zm00001e036248_P001


Description : CPN20 auxiliary co-chaperone involved in RuBisCo assembly. Hsp60-co-chaperone (Hsp20)


Gene families : OG0002206 (Archaeplastida) Phylogenetic Tree(s): OG0002206_tree ,
OG_05_0002586 (LandPlants) Phylogenetic Tree(s): OG_05_0002586_tree ,
OG_06_0003596 (SeedPlants) Phylogenetic Tree(s): OG_06_0003596_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e036248_P001
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AT5G20720 CPN21, ATCPN21,... chaperonin 20 0.07 Archaeplastida
Cre08.g358562 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Cre12.g505850 No alias External stimuli response.temperature.Hsp... 0.07 Archaeplastida
GSVIVT01008295001 No alias External stimuli response.temperature.Hsp... 0.05 Archaeplastida
GSVIVT01015036001 No alias External stimuli response.temperature.Hsp... 0.04 Archaeplastida
Gb_18360 No alias CPN20 auxiliary co-chaperone involved in RuBisCo... 0.04 Archaeplastida
LOC_Os06g09679.1 No alias CPN20 auxiliary co-chaperone involved in RuBisCo... 0.04 Archaeplastida
Mp1g10690.1 No alias CPN20 auxiliary co-chaperone involved in RuBisCo... 0.03 Archaeplastida
Pp3c22_7570V3.1 No alias chaperonin 20 0.03 Archaeplastida
Smo270691 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Solyc07g042250.3.1 No alias CPN20 auxiliary co-chaperone involved in RuBisCo... 0.06 Archaeplastida
Solyc12g009250.3.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e009881_P001 No alias CPN20 auxiliary co-chaperone involved in RuBisCo... 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006553 lysine metabolic process IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
MF GO:0008837 diaminopimelate epimerase activity IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009085 lysine biosynthetic process IEP Neighborhood
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0046451 diaminopimelate metabolic process IEP Neighborhood
MF GO:0047661 amino-acid racemase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR020818 Chaperonin_GroES 153 244
IPR020818 Chaperonin_GroES 55 144
No external refs found!