Zm00001e036286_P001

Description : cyclic nucleotide-gated cation channel (CNGC)

Gene families : OG0000137 (Archaeplastida) Phylogenetic Tree(s): OG0000137_tree ,
OG_05_0000296 (LandPlants) Phylogenetic Tree(s): OG_05_0000296_tree ,
OG_06_0001368 (SeedPlants) Phylogenetic Tree(s): OG_06_0001368_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e036286_P001
Cluster	HCCA: Cluster_342

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00152360	evm_27.TU.AmTr_v1...	Solute transport.channels.VIC superfamily.cyclic...	0.03	Archaeplastida
AMTR_s00053p00015490	evm_27.TU.AmTr_v1...	Solute transport.channels.VIC superfamily.cyclic...	0.03	Archaeplastida
AMTR_s00210p00019190	evm_27.TU.AmTr_v1...	Solute transport.channels.VIC superfamily.cyclic...	0.03	Archaeplastida
AT2G46430	ATCNGC3, CNGC3, CNGC3.C	cyclic nucleotide gated channel 3	0.03	Archaeplastida
AT3G17700	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-binding transporter 1	0.02	Archaeplastida
AT5G53130	ATCNGC1, CNGC1	cyclic nucleotide gated channel 1	0.03	Archaeplastida
GSVIVT01025208001	No alias	Solute transport.channels.VIC superfamily.cyclic...	0.02	Archaeplastida
GSVIVT01029404001	No alias	Solute transport.channels.VIC superfamily.cyclic...	0.03	Archaeplastida
GSVIVT01029407001	No alias	Solute transport.channels.VIC superfamily.cyclic...	0.02	Archaeplastida
Gb_31243	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.03	Archaeplastida
Gb_31623	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.03	Archaeplastida
LOC_Os04g55080.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.03	Archaeplastida
LOC_Os06g08850.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.06	Archaeplastida
LOC_Os09g38580.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.04	Archaeplastida
LOC_Os12g06570.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.02	Archaeplastida
LOC_Os12g28260.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.02	Archaeplastida
Solyc03g098210.4.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.04	Archaeplastida
Solyc07g005590.3.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.03	Archaeplastida
Solyc07g006510.3.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.05	Archaeplastida
Solyc12g010010.2.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.1	Archaeplastida
Zm00001e011591_P002	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.04	Archaeplastida
Zm00001e024846_P003	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
CC	GO:0000159	protein phosphatase type 2A complex	IEP	Neighborhood
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004560	alpha-L-fucosidase activity	IEP	Neighborhood
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Neighborhood
MF	GO:0004725	protein tyrosine phosphatase activity	IEP	Neighborhood
BP	GO:0006470	protein dephosphorylation	IEP	Neighborhood
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Neighborhood
MF	GO:0015928	fucosidase activity	IEP	Neighborhood
BP	GO:0016311	dephosphorylation	IEP	Neighborhood
MF	GO:0016791	phosphatase activity	IEP	Neighborhood
MF	GO:0019208	phosphatase regulator activity	IEP	Neighborhood
MF	GO:0019888	protein phosphatase regulator activity	IEP	Neighborhood
MF	GO:0070001	aspartic-type peptidase activity	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
CC	GO:1903293	phosphatase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005821	Ion_trans_dom	91	411
IPR000595	cNMP-bd_dom	506	595

External Links

No external refs found!

Zm00001e036286_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation