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  5. Zm00001e036636_P004

Zm00001e036636_P004


Description : NSR RNA splicing regulator


Gene families : OG0001050 (Archaeplastida) Phylogenetic Tree(s): OG0001050_tree ,
OG_05_0000850 (LandPlants) Phylogenetic Tree(s): OG_05_0000850_tree ,
OG_06_0000973 (SeedPlants) Phylogenetic Tree(s): OG_06_0000973_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e036636_P004
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01038597001 No alias RNA processing.RNA splicing.spliceosome-associated... 0.02 Archaeplastida
Gb_18526 No alias NSR RNA splicing regulator 0.04 Archaeplastida
LOC_Os06g03690.2 No alias NSR RNA splicing regulator 0.03 Archaeplastida
LOC_Os06g05530.1 No alias NSR RNA splicing regulator 0.02 Archaeplastida
LOC_Os09g35830.4 No alias NSR RNA splicing regulator 0.03 Archaeplastida
Solyc04g071050.4.1 No alias NSR RNA splicing regulator 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 163 233
No external refs found!