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  5. Zm00001e036845_P001

Zm00001e036845_P001


Description : 50S ribosomal protein L2, chloroplastic OS=Sorghum bicolor (sp|a1e9w6|rk2_sorbi : 219.0)


Gene families : OG0000693 (Archaeplastida) Phylogenetic Tree(s): OG0000693_tree ,
OG_05_0000458 (LandPlants) Phylogenetic Tree(s): OG_05_0000458_tree ,
OG_06_0000259 (SeedPlants) Phylogenetic Tree(s): OG_06_0000259_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e036845_P001
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
ATCG00830 RPL2.1 ribosomal protein L2 0.03 Archaeplastida
ATCG01310 RPL2.2 ribosomal protein L2 0.03 Archaeplastida
Mp1g19370.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Smo137825 No alias Protein biosynthesis.organelle translation... 0.07 Archaeplastida
Solyc09g050067.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.02 Archaeplastida
Solyc10g012217.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.02 Archaeplastida
Solyc10g018610.2.1 No alias No annotation 0.06 Archaeplastida
Zm00001e001581_P001 No alias No annotation 0.03 Archaeplastida
Zm00001e015952_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e042046_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e042062_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e042089_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009539 photosystem II reaction center IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Neighborhood
InterPro domains Description Start Stop
IPR022669 Ribosomal_L2_C 24 141
No external refs found!