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  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G15570

AT1G15570 (CYCA2;3)


Aliases : CYCA2;3

Description : CYCLIN A2;3


Gene families : OG0000635 (Archaeplastida) Phylogenetic Tree(s): OG0000635_tree ,
OG_05_0000438 (LandPlants) Phylogenetic Tree(s): OG_05_0000438_tree ,
OG_06_0000371 (SeedPlants) Phylogenetic Tree(s): OG_06_0000371_tree

Sequence : coding (download), protein (download)

Expression Profile


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Co-expression Networks

Type Description Actions
Neighborhood HRR: AT1G15570
Cluster HCCA: Cluster_101

Expression Context Conservation (ECC)

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000076.67 No alias Cyclin-A2-1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
MA_6619g0010 No alias cyclin (CYCA) 0.02 Archaeplastida
Pp3c1_38770V3.1 No alias Cyclin A1;1 0.03 Archaeplastida
Pp3c1_39100V3.1 No alias Cyclin A1;1 0.02 Archaeplastida

Functional Annotation

  • GO
  • Predicted GO
  • InterPro
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity None Extended
BP GO:0000226 microtubule cytoskeleton organization RCA Interproscan
BP GO:0000278 mitotic cell cycle RCA Interproscan
BP GO:0000280 nuclear division RCA Interproscan
BP GO:0000911 cytokinesis by cell plate formation RCA Interproscan
BP GO:0001558 regulation of cell growth None Extended
BP GO:0001932 regulation of protein phosphorylation None Extended
BP GO:0001933 negative regulation of protein phosphorylation None Extended
MF GO:0003674 molecular_function None Extended
MF GO:0005488 binding None Extended
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005575 cellular_component None Extended
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006139 nucleobase-containing compound metabolic process None Extended
BP GO:0006259 DNA metabolic process None Extended
BP GO:0006260 DNA replication None Extended
BP GO:0006261 DNA-dependent DNA replication None Extended
BP GO:0006275 regulation of DNA replication RCA Interproscan
BP GO:0006469 negative regulation of protein kinase activity None Extended
BP GO:0006508 proteolysis None Extended
BP GO:0006511 ubiquitin-dependent protein catabolic process None Extended
BP GO:0006725 cellular aromatic compound metabolic process None Extended
BP GO:0006807 nitrogen compound metabolic process None Extended
BP GO:0006950 response to stress None Extended
BP GO:0006996 organelle organization None Extended
BP GO:0007010 cytoskeleton organization None Extended
BP GO:0007017 microtubule-based process None Extended
BP GO:0007049 cell cycle None Extended
BP GO:0007051 spindle organization None Extended
BP GO:0007346 regulation of mitotic cell cycle None Extended
BP GO:0008150 biological_process None Extended
BP GO:0008152 metabolic process None Extended
BP GO:0008283 cell proliferation IGI Interproscan
BP GO:0009056 catabolic process None Extended
BP GO:0009057 macromolecule catabolic process None Extended
BP GO:0009058 biosynthetic process None Extended
BP GO:0009059 macromolecule biosynthetic process None Extended
BP GO:0009791 post-embryonic development None Extended
BP GO:0009889 regulation of biosynthetic process None Extended
BP GO:0009892 negative regulation of metabolic process None Extended
BP GO:0009987 cellular process None Extended
BP GO:0010033 response to organic substance None Extended
BP GO:0010311 lateral root formation IGI Interproscan
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IGI Interproscan
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle RCA Interproscan
BP GO:0010440 stomatal lineage progression RCA Interproscan
BP GO:0010498 proteasomal protein catabolic process None Extended
BP GO:0010556 regulation of macromolecule biosynthetic process None Extended
BP GO:0010563 negative regulation of phosphorus metabolic process None Extended
BP GO:0010564 regulation of cell cycle process None Extended
BP GO:0010605 negative regulation of macromolecule metabolic process None Extended
BP GO:0016043 cellular component organization None Extended
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity ISS Interproscan
MF GO:0019207 kinase regulator activity None Extended
BP GO:0019219 regulation of nucleobase-containing compound metabolic process None Extended
BP GO:0019220 regulation of phosphate metabolic process None Extended
BP GO:0019222 regulation of metabolic process None Extended
BP GO:0019538 protein metabolic process None Extended
MF GO:0019887 protein kinase regulator activity None Extended
BP GO:0019941 modification-dependent protein catabolic process None Extended
BP GO:0022402 cell cycle process None Extended
BP GO:0022603 regulation of anatomical structure morphogenesis None Extended
BP GO:0022604 regulation of cell morphogenesis None Extended
BP GO:0022607 cellular component assembly None Extended
BP GO:0030163 protein catabolic process None Extended
MF GO:0030234 enzyme regulator activity None Extended
BP GO:0031323 regulation of cellular metabolic process None Extended
BP GO:0031324 negative regulation of cellular metabolic process None Extended
BP GO:0031326 regulation of cellular biosynthetic process None Extended
BP GO:0031399 regulation of protein modification process None Extended
BP GO:0031400 negative regulation of protein modification process None Extended
BP GO:0032268 regulation of cellular protein metabolic process None Extended
BP GO:0032269 negative regulation of cellular protein metabolic process None Extended
BP GO:0032501 multicellular organismal process None Extended
BP GO:0032502 developmental process None Extended
BP GO:0032506 cytokinetic process None Extended
BP GO:0033673 negative regulation of kinase activity None Extended
BP GO:0034622 cellular protein-containing complex assembly None Extended
BP GO:0034641 cellular nitrogen compound metabolic process None Extended
BP GO:0034645 cellular macromolecule biosynthetic process None Extended
BP GO:0035966 response to topologically incorrect protein None Extended
BP GO:0040008 regulation of growth None Extended
BP GO:0042023 DNA endoreduplication IMP Interproscan
BP GO:0042023 DNA endoreduplication RCA Interproscan
BP GO:0042221 response to chemical None Extended
BP GO:0042325 regulation of phosphorylation None Extended
BP GO:0042326 negative regulation of phosphorylation None Extended
BP GO:0043086 negative regulation of catalytic activity None Extended
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process RCA Interproscan
BP GO:0043170 macromolecule metabolic process None Extended
CC GO:0043226 organelle None Extended
CC GO:0043227 membrane-bounded organelle None Extended
CC GO:0043229 intracellular organelle None Extended
CC GO:0043231 intracellular membrane-bounded organelle None Extended
BP GO:0043248 proteasome assembly RCA Interproscan
BP GO:0043549 regulation of kinase activity None Extended
BP GO:0043632 modification-dependent macromolecule catabolic process None Extended
BP GO:0043933 protein-containing complex subunit organization None Extended
BP GO:0044092 negative regulation of molecular function None Extended
BP GO:0044237 cellular metabolic process None Extended
BP GO:0044238 primary metabolic process None Extended
BP GO:0044248 cellular catabolic process None Extended
BP GO:0044249 cellular biosynthetic process None Extended
BP GO:0044260 cellular macromolecule metabolic process None Extended
BP GO:0044265 cellular macromolecule catabolic process None Extended
CC GO:0044424 intracellular part None Extended
CC GO:0044464 cell part None Extended
BP GO:0044786 cell cycle DNA replication None Extended
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity RCA Interproscan
BP GO:0045786 negative regulation of cell cycle None Extended
BP GO:0045859 regulation of protein kinase activity None Extended
BP GO:0045936 negative regulation of phosphate metabolic process None Extended
BP GO:0046483 heterocycle metabolic process None Extended
BP GO:0048285 organelle fission None Extended
BP GO:0048518 positive regulation of biological process None Extended
BP GO:0048519 negative regulation of biological process None Extended
BP GO:0048523 negative regulation of cellular process None Extended
BP GO:0048580 regulation of post-embryonic development None Extended
BP GO:0048582 positive regulation of post-embryonic development None Extended
BP GO:0048638 regulation of developmental growth None Extended
BP GO:0048646 anatomical structure formation involved in morphogenesis None Extended
BP GO:0048869 cellular developmental process None Extended
BP GO:0050789 regulation of biological process None Extended
BP GO:0050790 regulation of catalytic activity None Extended
BP GO:0050793 regulation of developmental process None Extended
BP GO:0050794 regulation of cellular process None Extended
BP GO:0050896 response to stimulus None Extended
BP GO:0051052 regulation of DNA metabolic process None Extended
BP GO:0051094 positive regulation of developmental process None Extended
BP GO:0051128 regulation of cellular component organization None Extended
BP GO:0051171 regulation of nitrogen compound metabolic process None Extended
BP GO:0051172 negative regulation of nitrogen compound metabolic process None Extended
BP GO:0051174 regulation of phosphorus metabolic process None Extended
BP GO:0051225 spindle assembly RCA Interproscan
BP GO:0051239 regulation of multicellular organismal process None Extended
BP GO:0051240 positive regulation of multicellular organismal process None Extended
BP GO:0051246 regulation of protein metabolic process None Extended
BP GO:0051248 negative regulation of protein metabolic process None Extended
BP GO:0051338 regulation of transferase activity None Extended
BP GO:0051348 negative regulation of transferase activity None Extended
BP GO:0051510 regulation of unidimensional cell growth RCA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process None Extended
BP GO:0051726 regulation of cell cycle ISS Interproscan
BP GO:0051788 response to misfolded protein RCA Interproscan
BP GO:0060255 regulation of macromolecule metabolic process None Extended
BP GO:0065003 protein-containing complex assembly None Extended
BP GO:0065007 biological regulation None Extended
BP GO:0065009 regulation of molecular function None Extended
BP GO:0070925 organelle assembly None Extended
BP GO:0071704 organic substance metabolic process None Extended
BP GO:0071840 cellular component organization or biogenesis None Extended
BP GO:0071900 regulation of protein serine/threonine kinase activity None Extended
BP GO:0071901 negative regulation of protein serine/threonine kinase activity None Extended
BP GO:0080090 regulation of primary metabolic process None Extended
BP GO:0090304 nucleic acid metabolic process None Extended
MF GO:0098772 molecular function regulator None Extended
BP GO:1901360 organic cyclic compound metabolic process None Extended
BP GO:1901564 organonitrogen compound metabolic process None Extended
BP GO:1901565 organonitrogen compound catabolic process None Extended
BP GO:1901575 organic substance catabolic process None Extended
BP GO:1901576 organic substance biosynthetic process None Extended
BP GO:1901987 regulation of cell cycle phase transition None Extended
BP GO:1901990 regulation of mitotic cell cycle phase transition None Extended
BP GO:1902410 mitotic cytokinetic process None Extended
BP GO:1902749 regulation of cell cycle G2/M phase transition None Extended
BP GO:1903047 mitotic cell cycle process None Extended
BP GO:1904029 regulation of cyclin-dependent protein kinase activity None Extended
BP GO:1904030 negative regulation of cyclin-dependent protein kinase activity None Extended
BP GO:1905393 plant organ formation None Extended
BP GO:2000026 regulation of multicellular organismal development None Extended
BP GO:2000038 regulation of stomatal complex development None Extended
BP GO:2000112 regulation of cellular macromolecule biosynthetic process None Extended
BP GO:2000123 positive regulation of stomatal complex development IGI Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity IEP Neighborhood
MF GO:0003896 DNA primase activity IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0005834 heterotrimeric G-protein complex IEP Neighborhood
BP GO:0006304 DNA modification IEP Neighborhood
BP GO:0006305 DNA alkylation IEP Neighborhood
BP GO:0006306 DNA methylation IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006342 chromatin silencing IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
BP GO:0007276 gamete generation IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
BP GO:0008360 regulation of cell shape IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0008810 cellulase activity IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0010091 trichome branching IEP Neighborhood
BP GO:0010482 regulation of epidermal cell division IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP Neighborhood
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0016572 histone phosphorylation IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
BP GO:0030029 actin filament-based process IEP Neighborhood
BP GO:0030048 actin filament-based movement IEP Neighborhood
BP GO:0030856 regulation of epithelial cell differentiation IEP Neighborhood
BP GO:0031128 developmental induction IEP Neighborhood
BP GO:0031129 inductive cell-cell signaling IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0032875 regulation of DNA endoreduplication IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0035064 methylated histone binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0040029 regulation of gene expression, epigenetic IEP Neighborhood
MF GO:0042171 lysophosphatidic acid acyltransferase activity IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
BP GO:0042814 monopolar cell growth IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0044728 DNA methylation or demethylation IEP Neighborhood
BP GO:0045595 regulation of cell differentiation IEP Neighborhood
BP GO:0045604 regulation of epidermal cell differentiation IEP Neighborhood
BP GO:0045682 regulation of epidermis development IEP Neighborhood
BP GO:0045814 negative regulation of gene expression, epigenetic IEP Neighborhood
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0046471 phosphatidylglycerol metabolic process IEP Neighborhood
BP GO:0048440 carpel development IEP Neighborhood
BP GO:0048444 floral organ morphogenesis IEP Neighborhood
BP GO:0048530 fruit morphogenesis IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0051253 negative regulation of RNA metabolic process IEP Neighborhood
BP GO:0051302 regulation of cell division IEP Neighborhood
BP GO:0051567 histone H3-K9 methylation IEP Neighborhood
BP GO:0051645 Golgi localization IEP Neighborhood
BP GO:0051646 mitochondrion localization IEP Neighborhood
BP GO:0060151 peroxisome localization IEP Neighborhood
BP GO:0060284 regulation of cell development IEP Neighborhood
BP GO:0061647 histone H3-K9 modification IEP Neighborhood
MF GO:0071617 lysophospholipid acyltransferase activity IEP Neighborhood
BP GO:0090329 regulation of DNA-dependent DNA replication IEP Neighborhood
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
MF GO:0140030 modification-dependent protein binding IEP Neighborhood
MF GO:0140034 methylation-dependent protein binding IEP Neighborhood
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Neighborhood
CC GO:1905360 GTPase complex IEP Neighborhood
BP GO:2000024 regulation of leaf development IEP Neighborhood
BP GO:2000039 regulation of trichome morphogenesis IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 320 442
IPR006671 Cyclin_N 191 318
External Links
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