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  5. AT3G52330

AT3G52330


Description : F-box associated ubiquitination effector family protein


Gene families : OG0000466 (Archaeplastida) Phylogenetic Tree(s): OG0000466_tree ,
OG_05_0000239 (LandPlants) Phylogenetic Tree(s): OG_05_0000239_tree ,
OG_06_0000111 (SeedPlants) Phylogenetic Tree(s): OG_06_0000111_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G52330
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT1G30925 No alias phospholipase Cs 0.05 Archaeplastida
AT1G32660 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT1G33010 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT1G43005 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.07 Archaeplastida
AT1G50880 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT1G52495 No alias No description available 0.05 Archaeplastida
AT1G53370 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT1G60370 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT1G67130 No alias F-box family protein 0.03 Archaeplastida
AT2G16220 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT3G23960 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT4G19940 No alias F-box and associated interaction domains-containing protein 0.02 Archaeplastida
AT4G38870 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT5G15660 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT5G18160 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT5G22791 No alias F-box family protein 0.03 Archaeplastida
AT5G42430 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT5G52620 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000769 syncytium formation by mitosis without cytokinesis IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006949 syncytium formation IEP Neighborhood
BP GO:0009556 microsporogenesis IEP Neighborhood
BP GO:0009960 endosperm development IEP Neighborhood
BP GO:0010440 stomatal lineage progression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0034293 sexual sporulation IEP Neighborhood
BP GO:0043934 sporulation IEP Neighborhood
BP GO:0048236 plant-type sporogenesis IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051321 meiotic cell cycle IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 197 226
No external refs found!