Description : Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica (sp|q8lhh9|shl2_orysj : 402.0)
Gene families : OG0000823 (Archaeplastida) Phylogenetic Tree(s): OG0000823_tree ,
OG_05_0003329 (LandPlants) Phylogenetic Tree(s): OG_05_0003329_tree ,
OG_06_0002749 (SeedPlants) Phylogenetic Tree(s): OG_06_0002749_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Pp3c24_15800V3.1 | No alias | RNA-dependent RNA polymerase 1 | 0.01 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003968 | RNA-directed 5'-3' RNA polymerase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Neighborhood |
CC | GO:0005681 | spliceosomal complex | IEP | Neighborhood |
BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
BP | GO:0006260 | DNA replication | IEP | Neighborhood |
BP | GO:0006508 | proteolysis | IEP | Neighborhood |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Neighborhood |
BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
BP | GO:0009056 | catabolic process | IEP | Neighborhood |
BP | GO:0009057 | macromolecule catabolic process | IEP | Neighborhood |
MF | GO:0015002 | heme-copper terminal oxidase activity | IEP | Neighborhood |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Neighborhood |
MF | GO:0034061 | DNA polymerase activity | IEP | Neighborhood |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Neighborhood |
BP | GO:0044248 | cellular catabolic process | IEP | Neighborhood |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Neighborhood |
BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Neighborhood |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
BP | GO:1901575 | organic substance catabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007855 | RNA-dep_RNA_pol_euk-typ | 2 | 184 |
No external refs found! |