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  5. Zm00001e037702_P001

Zm00001e037702_P001


Description : F-box protein AFR OS=Arabidopsis thaliana (sp|q8law2|afr_arath : 124.0)


Gene families : OG0007522 (Archaeplastida) Phylogenetic Tree(s): OG0007522_tree ,
OG_05_0005595 (LandPlants) Phylogenetic Tree(s): OG_05_0005595_tree ,
OG_06_0004617 (SeedPlants) Phylogenetic Tree(s): OG_06_0004617_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e037702_P001
Cluster HCCA: Cluster_366

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00203560 evm_27.TU.AmTr_v1... F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT2G24540 AFR Galactose oxidase/kelch repeat superfamily protein 0.02 Archaeplastida
Gb_02722 No alias F-box/kelch-repeat protein At1g30090 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os06g44500.1 No alias F-box protein AFR OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc02g021600.1.1 No alias F-box/kelch-repeat protein At1g30090 OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071985 multivesicular body sorting pathway IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 26 66
No external refs found!