Zm00001e037876_P002

Description : transcription factor (GATA)

Gene families : OG0000094 (Archaeplastida) Phylogenetic Tree(s): OG0000094_tree ,
OG_05_0000055 (LandPlants) Phylogenetic Tree(s): OG_05_0000055_tree ,
OG_06_0000244 (SeedPlants) Phylogenetic Tree(s): OG_06_0000244_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e037876_P002
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00011p00253850	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AMTR_s00056p00080350	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
AMTR_s00057p00121410	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.05	Archaeplastida
AMTR_s00106p00136770	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AT1G08000	GATA10	GATA transcription factor 10	0.03	Archaeplastida
AT2G45050	GATA2	GATA transcription factor 2	0.04	Archaeplastida
AT3G20750	GATA29	GATA transcription factor 29	0.03	Archaeplastida
AT4G26150	GATA22, CGA1, GNL	cytokinin-responsive gata factor 1	0.03	Archaeplastida
AT4G34680	GATA3	GATA transcription factor 3	0.02	Archaeplastida
Cre01.g025050	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.01	Archaeplastida
GSVIVT01017011001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
GSVIVT01018833001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
GSVIVT01018951001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
GSVIVT01033385001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.05	Archaeplastida
GSVIVT01035614001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
Gb_24250	No alias	transcription factor (GATA)	0.03	Archaeplastida
Gb_25568	No alias	transcription factor (GATA)	0.05	Archaeplastida
Gb_34837	No alias	transcription factor (GATA)	0.02	Archaeplastida
LOC_Os01g47360.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
LOC_Os02g12790.1	No alias	transcription factor (GATA)	0.04	Archaeplastida
LOC_Os02g56250.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
LOC_Os03g05160.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
LOC_Os06g37450.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
LOC_Os10g32070.1	No alias	transcription factor (GATA)	0.04	Archaeplastida
LOC_Os10g40810.1	No alias	transcription factor (GATA)	0.04	Archaeplastida
LOC_Os12g07120.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
MA_10434815g0010	No alias	transcription factor (GATA)	0.02	Archaeplastida
Solyc02g084590.4.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
Solyc03g033660.4.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
Solyc05g056120.3.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
Solyc10g018560.2.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
Zm00001e006272_P001	No alias	transcription factor (GATA)	0.03	Archaeplastida
Zm00001e009216_P001	No alias	transcription factor (GATA)	0.02	Archaeplastida
Zm00001e029060_P002	No alias	transcription factor (GATA)	0.03	Archaeplastida
Zm00001e039468_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e039469_P001	No alias	transcription factor (GATA)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005507	copper ion binding	IEP	Neighborhood
BP	GO:0006813	potassium ion transport	IEP	Neighborhood
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0071804	cellular potassium ion transport	IEP	Neighborhood
BP	GO:0071805	potassium ion transmembrane transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	275	310

External Links

No external refs found!

Zm00001e037876_P002

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation