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  5. Zm00001e037879_P001

Zm00001e037879_P001


Description : Expansin-B3 OS=Oryza sativa subsp. japonica (sp|q336t5|expb3_orysj : 422.0)


Gene families : OG0000383 (Archaeplastida) Phylogenetic Tree(s): OG0000383_tree ,
OG_05_0000369 (LandPlants) Phylogenetic Tree(s): OG_05_0000369_tree ,
OG_06_0011629 (SeedPlants) Phylogenetic Tree(s): OG_06_0011629_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e037879_P001
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00266410 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.beta-type expansin 0.03 Archaeplastida
AMTR_s00111p00059150 evm_27.TU.AmTr_v1... Putative expansin-B2 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G65680 ATHEXP BETA 1.4,... expansin B2 0.04 Archaeplastida
AT2G20750 EXPB1, ATEXPB1,... expansin B1 0.08 Archaeplastida
AT3G60570 ATHEXP BETA 1.3,... expansin B5 0.04 Archaeplastida
Gb_19114 No alias beta-like-class expansin 0.04 Archaeplastida
LOC_Os02g42650.1 No alias beta-class expansin 0.03 Archaeplastida
LOC_Os02g44106.1 No alias Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os02g44108.1 No alias Expansin-B11 OS=Oryza sativa subsp. japonica... 0.08 Archaeplastida
LOC_Os03g01260.1 No alias Expansin-B8 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os03g01270.1 No alias Expansin-B7 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os03g01610.1 No alias Expansin-B1 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os03g01640.1 No alias Expansin-B10 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os03g01650.1 No alias Expansin-B1 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os04g44780.1 No alias Expansin-B17 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os04g46630.1 No alias Expansin-B15 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os04g46650.1 No alias Expansin-B5 OS=Oryza sativa subsp. japonica... 0.14 Archaeplastida
LOC_Os05g15690.1 No alias Expansin-B18 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os10g40090.1 No alias Expansin-B9 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os10g40700.1 No alias Expansin-B6 OS=Oryza sativa subsp. japonica... 0.12 Archaeplastida
LOC_Os10g40710.1 No alias Expansin-B2 OS=Oryza sativa subsp. japonica... 0.08 Archaeplastida
MA_10313796g0010 No alias Expansin-B16 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_166764g0010 No alias Expansin-B17 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_21214g0010 No alias beta-class expansin 0.03 Archaeplastida
MA_78155g0010 No alias Expansin-B17 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Pp3c1_37980V3.1 No alias expansin B3 0.03 Archaeplastida
Smo171427 No alias Expansin-B17 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Solyc03g093390.4.1 No alias Expansin-B15 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Solyc07g054170.3.1 No alias beta-class expansin 0.03 Archaeplastida
Solyc10g008440.3.1 No alias beta-class expansin 0.04 Archaeplastida
Zm00001e000038_P001 No alias Expansin-B7 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e002337_P001 No alias Expansin-B3 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
Zm00001e005019_P001 No alias Expansin-B12 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e007438_P001 No alias beta-class expansin 0.03 Archaeplastida
Zm00001e015230_P001 No alias beta-class expansin 0.02 Archaeplastida
Zm00001e015336_P002 No alias Expansin-B11 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e023169_P003 No alias Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e036860_P001 No alias Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
Zm00001e036907_P001 No alias Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
Zm00001e037884_P001 No alias Expansin-B6 OS=Oryza sativa subsp. japonica... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 80 159
IPR007117 Expansin_CBD 171 252
No external refs found!