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Description : LNK circadian clock transcriptional co-activator
Gene families : OG0001777 (Archaeplastida) Phylogenetic Tree(s): OG0001777_tree ,
OG_05_0001310 (LandPlants) Phylogenetic Tree(s): OG_05_0001310_tree ,
OG_06_0004326 (SeedPlants) Phylogenetic Tree(s): OG_06_0004326_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e037970_P002 | |
| Cluster | HCCA: Cluster_351 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00101p00159320 | evm_27.TU.AmTr_v1... | No description available | 0.06 | Archaeplastida | |
| AT3G12320 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.12 | Archaeplastida | |
| AT3G54500 | No alias | BEST Arabidopsis thaliana protein match is: dentin... | 0.07 | Archaeplastida | |
| AT5G06980 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.06 | Archaeplastida | |
| AT5G64170 | No alias | dentin sialophosphoprotein-related | 0.07 | Archaeplastida | |
| GSVIVT01003080001 | No alias | Protein LNK1 OS=Arabidopsis thaliana | 0.1 | Archaeplastida | |
| GSVIVT01003081001 | No alias | Multi-process regulation.circadian clock.evening element... | 0.09 | Archaeplastida | |
| GSVIVT01036604001 | No alias | No description available | 0.07 | Archaeplastida | |
| LOC_Os01g17396.2 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| LOC_Os01g31360.2 | No alias | LNK circadian clock transcriptional co-activator | 0.06 | Archaeplastida | |
| LOC_Os03g27019.1 | No alias | LNK circadian clock transcriptional co-activator | 0.06 | Archaeplastida | |
| Pp3c13_6620V3.1 | No alias | No annotation | 0.03 | Archaeplastida | |
| Pp3c3_2690V3.1 | No alias | No annotation | 0.03 | Archaeplastida | |
| Smo417164 | No alias | No description available | 0.02 | Archaeplastida | |
| Solyc01g096630.3.1 | No alias | no hits & (original description: none) | 0.15 | Archaeplastida | |
| Solyc01g105120.4.1 | No alias | LNK circadian clock transcriptional co-activator | 0.09 | Archaeplastida | |
| Solyc04g009050.4.1 | No alias | LNK circadian clock transcriptional co-activator | 0.09 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0003779 | actin binding | IEP | Neighborhood |
| MF | GO:0004014 | adenosylmethionine decarboxylase activity | IEP | Neighborhood |
| BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Neighborhood |
| BP | GO:0006595 | polyamine metabolic process | IEP | Neighborhood |
| BP | GO:0006596 | polyamine biosynthetic process | IEP | Neighborhood |
| BP | GO:0006597 | spermine biosynthetic process | IEP | Neighborhood |
| BP | GO:0006644 | phospholipid metabolic process | IEP | Neighborhood |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | Neighborhood |
| BP | GO:0006813 | potassium ion transport | IEP | Neighborhood |
| BP | GO:0007165 | signal transduction | IEP | Neighborhood |
| BP | GO:0008215 | spermine metabolic process | IEP | Neighborhood |
| BP | GO:0008216 | spermidine metabolic process | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| BP | GO:0008295 | spermidine biosynthetic process | IEP | Neighborhood |
| BP | GO:0009308 | amine metabolic process | IEP | Neighborhood |
| BP | GO:0009309 | amine biosynthetic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Neighborhood |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | Neighborhood |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| BP | GO:0042401 | cellular biogenic amine biosynthetic process | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0044106 | cellular amine metabolic process | IEP | Neighborhood |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | Neighborhood |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0071804 | cellular potassium ion transport | IEP | Neighborhood |
| BP | GO:0071805 | potassium ion transmembrane transport | IEP | Neighborhood |
| BP | GO:0097164 | ammonium ion metabolic process | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |