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  5. Zm00001e038043_P001

Zm00001e038043_P001


Description : COB cellulose microfibrils and hemicellulose interaction protein


Gene families : OG0000661 (Archaeplastida) Phylogenetic Tree(s): OG0000661_tree ,
OG_05_0000695 (LandPlants) Phylogenetic Tree(s): OG_05_0000695_tree ,
OG_06_0000657 (SeedPlants) Phylogenetic Tree(s): OG_06_0000657_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038043_P001
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00083860 evm_27.TU.AmTr_v1... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.02 Archaeplastida
AMTR_s00047p00216570 evm_27.TU.AmTr_v1... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.1 Archaeplastida
AT5G15630 IRX6, COBL4 COBRA-like extracellular glycosyl-phosphatidyl... 0.21 Archaeplastida
AT5G60920 COB COBRA-like extracellular glycosyl-phosphatidyl... 0.07 Archaeplastida
GSVIVT01008129001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.22 Archaeplastida
GSVIVT01036565001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.18 Archaeplastida
GSVIVT01036566001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.02 Archaeplastida
Gb_25603 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida
Gb_36719 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.12 Archaeplastida
Gb_36720 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
LOC_Os03g30250.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.19 Archaeplastida
LOC_Os03g54750.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.08 Archaeplastida
LOC_Os05g32110.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.15 Archaeplastida
LOC_Os07g41320.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.08 Archaeplastida
MA_106654g0010 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida
MA_4056g0010 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.07 Archaeplastida
MA_40967g0020 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.03 Archaeplastida
MA_637485g0010 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.11 Archaeplastida
Mp7g06600.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
Pp3c12_4550V3.1 No alias COBRA-like protein 1 precursor 0.03 Archaeplastida
Pp3c20_16270V3.1 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Archaeplastida
Pp3c2_9820V3.1 No alias COBRA-like protein 1 precursor 0.03 Archaeplastida
Smo271954 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.09 Archaeplastida
Solyc02g065765.1.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.08 Archaeplastida
Solyc02g089130.4.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.13 Archaeplastida
Solyc03g070440.4.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.19 Archaeplastida
Solyc03g114890.4.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
Solyc03g114900.3.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.18 Archaeplastida
Solyc03g114910.4.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida
Zm00001e012022_P001 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA Interproscan
CC GO:0031225 anchored component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006555 methionine metabolic process IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008172 S-methyltransferase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008198 ferrous iron binding IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009086 methionine biosynthetic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006918 COBRA_pln 96 259
No external refs found!