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  5. Zm00001e038095_P001

Zm00001e038095_P001


Description : SUMO conjugation E2 enzyme (SCE1)


Gene families : OG0001771 (Archaeplastida) Phylogenetic Tree(s): OG0001771_tree ,
OG_05_0002013 (LandPlants) Phylogenetic Tree(s): OG_05_0002013_tree ,
OG_06_0002039 (SeedPlants) Phylogenetic Tree(s): OG_06_0002039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038095_P001
Cluster HCCA: Cluster_296

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g03130.1 No alias SUMO conjugation E2 enzyme (SCE1) 0.03 Archaeplastida
Solyc02g093110.3.1 No alias SUMO conjugation E2 enzyme (SCE1) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0097526 spliceosomal tri-snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 9 151
No external refs found!