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  5. AT3G53060

AT3G53060 (SK6, ASK6)


Aliases : SK6, ASK6

Description : SKP1-like 6


Gene families : OG0000418 (Archaeplastida) Phylogenetic Tree(s): OG0000418_tree ,
OG_05_0046722 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0041391 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G53060
Cluster HCCA: Cluster_355

Target Alias Description ECC score Gene Family Method Actions
AT2G03160 SK19, ASK19 SKP1-like 19 0.04 Archaeplastida
AT2G03170 ASK14, SK14 SKP1-like 14 0.06 Archaeplastida
AT2G25700 ASK3, SK3 SKP1-like 3 0.02 Archaeplastida
AT3G21830 SK8, ASK8 SKP1-like 8 0.03 Archaeplastida
AT3G21840 ASK7, SK7 SKP1-like 7 0.03 Archaeplastida
AT3G21860 ASK10, SK10 SKP1-like 10 0.04 Archaeplastida
AT3G60020 SK5, ASK5 SKP1-like 5 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0019005 SCF ubiquitin ligase complex TAS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR016073 Skp1_comp_POZ 2 37
No external refs found!