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  5. Zm00001e038229_P001

Zm00001e038229_P001


Description : no hits & (original description: none)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0000056 (SeedPlants) Phylogenetic Tree(s): OG_06_0000056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038229_P001
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AT1G49210 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT3G11110 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G18773 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT3G20395 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT3G61460 BRH1 brassinosteroid-responsive RING-H2 0.03 Archaeplastida
AT4G30370 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT4G35480 RHA3B RING-H2 finger A3B 0.03 Archaeplastida
AT4G38140 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT5G41400 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G42200 No alias RING/U-box superfamily protein 0.02 Archaeplastida
GSVIVT01022306001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_02533 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_04643 No alias RING-H2 finger protein ATL60 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_04644 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_04645 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_07702 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Gb_35824 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_40644 No alias no hits & (original description: none) 0.11 Archaeplastida
Gb_41046 No alias Putative RING-H2 finger protein ATL12 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os01g11520.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os01g64620.1 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g49710.1 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.04 Archaeplastida
LOC_Os02g57460.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os03g05570.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os04g16970.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g37740.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os06g11450.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os06g45580.1 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os07g06560.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os09g29310.1 No alias RING-H2-class E3 ligase 0.08 Archaeplastida
MA_10436650g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_1252g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_15246g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_181940g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_2159g0010 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_373963g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_479316g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_754688g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_77628g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_786911g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_85088g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_895676g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
Pp3c18_5860V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c1_32230V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c1_9560V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Smo101273 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Solyc02g082420.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc03g083460.3.1 No alias RING-H2 finger protein ATL22 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc03g123680.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc06g053640.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc09g089890.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc10g009487.1.1 No alias RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e011306_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e026193_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e036289_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 91 134
No external refs found!