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  5. Zm00001e038273_P001

Zm00001e038273_P001


Description : E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica (sp|q6avn2|sirp1_orysj : 115.0)


Gene families : OG0000041 (Archaeplastida) Phylogenetic Tree(s): OG0000041_tree ,
OG_05_0007405 (LandPlants) Phylogenetic Tree(s): OG_05_0007405_tree ,
OG_06_0003946 (SeedPlants) Phylogenetic Tree(s): OG_06_0003946_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038273_P001
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00157p00061490 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT1G18770 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT1G60360 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G68180 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G13430 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G46620 No alias zinc finger (C3HC4-type RING finger) family protein 0.05 Archaeplastida
AT3G51325 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G59550 No alias zinc finger (C3HC4-type RING finger) family protein 0.04 Archaeplastida
GSVIVT01015309001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01024920001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_19820 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_22125 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os03g16480.1 No alias E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os03g20870.1 No alias E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os05g01940.1 No alias elicitor peptide precursor (proPEP) 0.03 Archaeplastida
LOC_Os06g01200.1 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.02 Archaeplastida
LOC_Os06g42700.1 No alias E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_3413240g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_41001g0010 No alias Probable E3 ubiquitin-protein ligase RHC2A... 0.03 Archaeplastida
MA_619596g0010 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.02 Archaeplastida
MA_79051g0010 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.02 Archaeplastida
Mp7g15970.1 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.02 Archaeplastida
Pp3c2_5960V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Smo18753 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc05g018050.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc06g005650.2.1 No alias E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis... 0.05 Archaeplastida
Solyc08g067290.3.1 No alias AIP2 signal transducer of abscisic acid perception 0.03 Archaeplastida
Zm00001e003411_P001 No alias E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e016135_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e024455_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e031979_P001 No alias E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e038493_P001 No alias E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0043545 molybdopterin cofactor metabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0051189 prosthetic group metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 213 255
No external refs found!