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Description : proteolytic core component ClpP1/3-6 of chloroplast Clp-type protease complex
Gene families : OG0001597 (Archaeplastida) Phylogenetic Tree(s): OG0001597_tree ,
OG_05_0006556 (LandPlants) Phylogenetic Tree(s): OG_05_0006556_tree ,
OG_06_0007902 (SeedPlants) Phylogenetic Tree(s): OG_06_0007902_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e038326_P005 | |
| Cluster | HCCA: Cluster_199 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G23140 | CLPP2, NCLPP7 | nuclear-encoded CLP protease P7 | 0.02 | Archaeplastida | |
| Cpa|evm.model.tig00021522.2 | No alias | ATP-dependent Clp protease proteolytic subunit 5,... | 0.02 | Archaeplastida | |
| Cre12.g486100 | No alias | Protein degradation.peptidase families.serine-type... | 0.04 | Archaeplastida | |
| GSVIVT01012051001 | No alias | ATP-dependent Clp protease proteolytic subunit 2,... | 0.03 | Archaeplastida | |
| GSVIVT01028130001 | No alias | Protein degradation.peptidase families.serine-type... | 0.08 | Archaeplastida | |
| Gb_02667 | No alias | proteolytic core component ClpP1/3-6 of chloroplast... | 0.03 | Archaeplastida | |
| LOC_Os03g19510.1 | No alias | proteolytic core component ClpP1/3-6 of chloroplast... | 0.15 | Archaeplastida | |
| MA_806g0010 | No alias | ATP-dependent Clp protease proteolytic subunit 5,... | 0.02 | Archaeplastida | |
| Mp2g19280.1 | No alias | proteolytic core component ClpP1/3-6 of chloroplast... | 0.05 | Archaeplastida | |
| Solyc01g100520.3.1 | No alias | proteolytic core component ClpP1/3-6 of chloroplast... | 0.07 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | Neighborhood |
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
| MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
| MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0004392 | heme oxygenase (decyclizing) activity | IEP | Neighborhood |
| MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | Neighborhood |
| MF | GO:0004519 | endonuclease activity | IEP | Neighborhood |
| MF | GO:0004784 | superoxide dismutase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005525 | GTP binding | IEP | Neighborhood |
| CC | GO:0005759 | mitochondrial matrix | IEP | Neighborhood |
| BP | GO:0006457 | protein folding | IEP | Neighborhood |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006788 | heme oxidation | IEP | Neighborhood |
| BP | GO:0006801 | superoxide metabolic process | IEP | Neighborhood |
| BP | GO:0009451 | RNA modification | IEP | Neighborhood |
| CC | GO:0009521 | photosystem | IEP | Neighborhood |
| CC | GO:0009523 | photosystem II | IEP | Neighborhood |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Neighborhood |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Neighborhood |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Neighborhood |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Neighborhood |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Neighborhood |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Neighborhood |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Neighborhood |
| MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| BP | GO:0042168 | heme metabolic process | IEP | Neighborhood |
| BP | GO:0042440 | pigment metabolic process | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| CC | GO:0043233 | organelle lumen | IEP | Neighborhood |
| CC | GO:0044429 | mitochondrial part | IEP | Neighborhood |
| CC | GO:0044436 | thylakoid part | IEP | Neighborhood |
| MF | GO:0051082 | unfolded protein binding | IEP | Neighborhood |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Neighborhood |
| MF | GO:0071949 | FAD binding | IEP | Neighborhood |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| CC | GO:1990204 | oxidoreductase complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023562 | ClpP/TepA | 92 | 269 |
| No external refs found! |