- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : transcription factor (AS2/LOB)
Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0000043 (SeedPlants) Phylogenetic Tree(s): OG_06_0000043_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e038429_P001 | |
| Cluster | HCCA: Cluster_337 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00080p00153120 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.07 | Archaeplastida | |
| AT1G06280 | LBD2 | LOB domain-containing protein 2 | 0.03 | Archaeplastida | |
| AT1G07900 | LBD1 | LOB domain-containing protein 1 | 0.03 | Archaeplastida | |
| AT1G65620 | AS2 | Lateral organ boundaries (LOB) domain family protein | 0.03 | Archaeplastida | |
| AT2G28500 | LBD11 | LOB domain-containing protein 11 | 0.03 | Archaeplastida | |
| AT2G30130 | LBD12, ASL5, PCK1 | Lateral organ boundaries (LOB) domain family protein | 0.02 | Archaeplastida | |
| AT2G30340 | LBD13 | LOB domain-containing protein 13 | 0.05 | Archaeplastida | |
| AT2G40470 | LBD15, ASL11 | LOB domain-containing protein 15 | 0.02 | Archaeplastida | |
| GSVIVT01003547001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.02 | Archaeplastida | |
| GSVIVT01016330001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.04 | Archaeplastida | |
| GSVIVT01016335001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.11 | Archaeplastida | |
| GSVIVT01024592001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.02 | Archaeplastida | |
| GSVIVT01025128001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.04 | Archaeplastida | |
| GSVIVT01032752001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.04 | Archaeplastida | |
| Gb_03653 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Gb_08465 | No alias | transcription factor (AS2/LOB) | 0.04 | Archaeplastida | |
| Gb_16914 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| Gb_19383 | No alias | transcription factor (AS2/LOB) | 0.06 | Archaeplastida | |
| Gb_19390 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Gb_22180 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| LOC_Os03g17810.1 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| LOC_Os05g27980.1 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| MA_10430986g0010 | No alias | transcription factor (AS2/LOB) | 0.09 | Archaeplastida | |
| MA_161608g0010 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| MA_16646g0010 | No alias | transcription factor (AS2/LOB) | 0.04 | Archaeplastida | |
| MA_16891g0010 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| MA_290245g0010 | No alias | transcription factor (AS2/LOB) | 0.05 | Archaeplastida | |
| MA_88711g0010 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| Solyc01g109240.3.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Solyc02g069440.3.1 | No alias | transcription factor (AS2/LOB) | 0.05 | Archaeplastida | |
| Solyc06g005090.3.1 | No alias | transcription factor (AS2/LOB) | 0.06 | Archaeplastida | |
| Solyc06g050950.3.1 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Solyc06g071660.3.1 | No alias | transcription factor (AS2/LOB) | 0.04 | Archaeplastida | |
| Solyc11g072470.3.1 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Zm00001e026736_P001 | No alias | transcription factor (AS2/LOB) | 0.04 | Archaeplastida | |
| Zm00001e031510_P001 | No alias | transcription factor (AS2/LOB) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004180 | carboxypeptidase activity | IEP | Neighborhood |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Neighborhood |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0004568 | chitinase activity | IEP | Neighborhood |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | Neighborhood |
| MF | GO:0004866 | endopeptidase inhibitor activity | IEP | Neighborhood |
| MF | GO:0004867 | serine-type endopeptidase inhibitor activity | IEP | Neighborhood |
| MF | GO:0004869 | cysteine-type endopeptidase inhibitor activity | IEP | Neighborhood |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | Neighborhood |
| BP | GO:0006026 | aminoglycan catabolic process | IEP | Neighborhood |
| BP | GO:0006030 | chitin metabolic process | IEP | Neighborhood |
| BP | GO:0006032 | chitin catabolic process | IEP | Neighborhood |
| BP | GO:0006040 | amino sugar metabolic process | IEP | Neighborhood |
| BP | GO:0006950 | response to stress | IEP | Neighborhood |
| BP | GO:0006952 | defense response | IEP | Neighborhood |
| MF | GO:0008061 | chitin binding | IEP | Neighborhood |
| MF | GO:0008238 | exopeptidase activity | IEP | Neighborhood |
| BP | GO:0009605 | response to external stimulus | IEP | Neighborhood |
| BP | GO:0009607 | response to biotic stimulus | IEP | Neighborhood |
| BP | GO:0009611 | response to wounding | IEP | Neighborhood |
| BP | GO:0009617 | response to bacterium | IEP | Neighborhood |
| BP | GO:0009620 | response to fungus | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Neighborhood |
| MF | GO:0030234 | enzyme regulator activity | IEP | Neighborhood |
| MF | GO:0030414 | peptidase inhibitor activity | IEP | Neighborhood |
| BP | GO:0042737 | drug catabolic process | IEP | Neighborhood |
| BP | GO:0042742 | defense response to bacterium | IEP | Neighborhood |
| BP | GO:0043207 | response to external biotic stimulus | IEP | Neighborhood |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0046348 | amino sugar catabolic process | IEP | Neighborhood |
| BP | GO:0050832 | defense response to fungus | IEP | Neighborhood |
| BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
| BP | GO:0051704 | multi-organism process | IEP | Neighborhood |
| BP | GO:0051707 | response to other organism | IEP | Neighborhood |
| MF | GO:0061134 | peptidase regulator activity | IEP | Neighborhood |
| MF | GO:0061135 | endopeptidase regulator activity | IEP | Neighborhood |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| BP | GO:0098542 | defense response to other organism | IEP | Neighborhood |
| MF | GO:0098772 | molecular function regulator | IEP | Neighborhood |
| BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | Neighborhood |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Neighborhood |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004883 | LOB | 64 | 161 |
| No external refs found! |