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  5. Zm00001e038466_P001

Zm00001e038466_P001


Description : histone (H2B)


Gene families : OG0000186 (Archaeplastida) Phylogenetic Tree(s): OG0000186_tree ,
OG_05_0065815 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0059475 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038466_P001
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00228620 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2B-type histone 0.04 Archaeplastida
AMTR_s00012p00067980 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
AMTR_s00012p00085300 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2B-type histone 0.06 Archaeplastida
AMTR_s00012p00085960 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2B-type histone 0.05 Archaeplastida
AMTR_s00012p00088340 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2B-type histone 0.04 Archaeplastida
AT1G07790 HTB1 Histone superfamily protein 0.05 Archaeplastida
AT3G45980 HTB9, H2B Histone superfamily protein 0.05 Archaeplastida
AT3G46030 HTB11 Histone superfamily protein 0.17 Archaeplastida
AT5G22880 HTB2, H2B histone B2 0.04 Archaeplastida
AT5G59910 HTB4 Histone superfamily protein 0.06 Archaeplastida
Cpa|evm.model.tig00000944.18 No alias Chromatin organisation.histones.H2B-type histone 0.03 Archaeplastida
Cre06.g264800 No alias Chromatin organisation.histones.H2B-type histone 0.03 Archaeplastida
Cre06.g264900 No alias Chromatin organisation.histones.H2B-type histone 0.21 Archaeplastida
Cre06.g266750 No alias Chromatin organisation.histones.H2B-type histone 0.03 Archaeplastida
Cre06.g271376 No alias Chromatin organisation.histones.H2B-type histone 0.4 Archaeplastida
Cre06.g273850 No alias Chromatin organisation.histones.H2B-type histone 0.06 Archaeplastida
Cre06.g274250 No alias Chromatin organisation.histones.H2B-type histone 0.12 Archaeplastida
Cre06.g275800 No alias Chromatin organisation.histones.H2B-type histone 0.06 Archaeplastida
Cre06.g276550 No alias Chromatin organisation.histones.H2B-type histone 0.25 Archaeplastida
Cre06.g276900 No alias Chromatin organisation.histones.H2B-type histone 0.04 Archaeplastida
Cre12.g504550 No alias Chromatin organisation.histones.H2B-type histone 0.03 Archaeplastida
Cre12.g504700 No alias Chromatin organisation.histones.H2B-type histone 0.13 Archaeplastida
Cre12.g505600 No alias Chromatin organisation.histones.H2B-type histone 0.04 Archaeplastida
Cre12.g506200 No alias Chromatin organisation.histones.H2B-type histone 0.14 Archaeplastida
Cre13.g570050 No alias Chromatin organisation.histones.H2B-type histone 0.27 Archaeplastida
Cre17.g709150 No alias Chromatin organisation.histones.H2B-type histone 0.23 Archaeplastida
Cre17.g710450 No alias Chromatin organisation.histones.H2B-type histone 0.25 Archaeplastida
Cre17.g711750 No alias Chromatin organisation.histones.H2B-type histone 0.21 Archaeplastida
Cre17.g713450 No alias Chromatin organisation.histones.H2B-type histone 0.22 Archaeplastida
Cre17.g714050 No alias Chromatin organisation.histones.H2B-type histone 0.2 Archaeplastida
GSVIVT01016164001 No alias Chromatin organisation.histones.H2B-type histone 0.14 Archaeplastida
GSVIVT01025021001 No alias Chromatin organisation.histones.H2B-type histone 0.06 Archaeplastida
GSVIVT01025023001 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
GSVIVT01025025001 No alias Chromatin organisation.histones.H2B-type histone 0.07 Archaeplastida
Gb_02245 No alias histone (H2B) 0.25 Archaeplastida
Gb_12082 No alias histone (H2B) 0.08 Archaeplastida
Gb_12096 No alias histone (H2B) 0.04 Archaeplastida
Gb_25549 No alias histone (H2B) 0.08 Archaeplastida
Gb_26315 No alias histone (H2B) 0.14 Archaeplastida
Gb_32754 No alias histone (H2B) 0.1 Archaeplastida
Gb_41617 No alias histone (H2B) 0.05 Archaeplastida
LOC_Os01g05610.1 No alias histone (H2B) 0.03 Archaeplastida
LOC_Os01g05900.1 No alias histone (H2B) 0.12 Archaeplastida
LOC_Os01g05970.1 No alias histone (H2B) 0.06 Archaeplastida
LOC_Os01g06010.1 No alias histone (H2B) 0.09 Archaeplastida
LOC_Os01g62230.1 No alias histone (H2B) 0.03 Archaeplastida
LOC_Os03g17084.1 No alias histone (H2B) 0.3 Archaeplastida
LOC_Os05g49860.1 No alias histone (H2B) 0.18 Archaeplastida
LOC_Os08g38300.1 No alias histone (H2B) 0.14 Archaeplastida
MA_10151143g0010 No alias histone (H2B) 0.02 Archaeplastida
MA_10428006g0010 No alias histone (H2B) 0.14 Archaeplastida
MA_10435143g0010 No alias histone (H2B) 0.14 Archaeplastida
MA_10436516g0010 No alias histone (H2B) 0.02 Archaeplastida
MA_10436516g0020 No alias histone (H2B) 0.06 Archaeplastida
MA_38565g0010 No alias histone (H2B) 0.03 Archaeplastida
MA_454575g0010 No alias histone (H2B) 0.06 Archaeplastida
MA_6078786g0010 No alias histone (H2B) 0.06 Archaeplastida
MA_77198g0010 No alias histone (H2B) 0.02 Archaeplastida
MA_8065g0010 No alias histone (H2B) 0.04 Archaeplastida
MA_9293473g0010 No alias histone (H2B) 0.07 Archaeplastida
Mp4g13450.1 No alias histone (H2B) 0.04 Archaeplastida
Mp6g04070.1 No alias histone (H2B) 0.13 Archaeplastida
Mp6g07010.1 No alias histone (H2B) 0.03 Archaeplastida
Pp3c12_7610V3.1 No alias Histone superfamily protein 0.17 Archaeplastida
Pp3c13_23540V3.1 No alias Histone superfamily protein 0.03 Archaeplastida
Pp3c14_21050V3.1 No alias Histone superfamily protein 0.14 Archaeplastida
Pp3c6_27740V3.1 No alias Histone superfamily protein 0.07 Archaeplastida
Smo182308 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Smo7113 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Solyc02g038690.1.1 No alias histone (H2B) 0.19 Archaeplastida
Solyc03g071620.2.1 No alias histone (H2B) 0.2 Archaeplastida
Solyc05g055440.1.1 No alias histone (H2B) 0.27 Archaeplastida
Solyc06g074780.1.1 No alias histone (H2B) 0.18 Archaeplastida
Solyc06g074790.2.1 No alias histone (H2B) 0.21 Archaeplastida
Solyc06g075800.1.1 No alias histone (H2B) 0.11 Archaeplastida
Solyc11g007920.1.1 No alias histone (H2B) 0.22 Archaeplastida
Solyc11g007930.1.1 No alias histone (H2B) 0.2 Archaeplastida
Solyc11g066430.2.1 No alias histone (H2B) 0.21 Archaeplastida
Solyc12g013510.1.1 No alias histone (H2B) 0.2 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 4 124
No external refs found!