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  5. Zm00001e038479_P002

Zm00001e038479_P002


Description : transcription factor (DOF)


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0017237 (SeedPlants) Phylogenetic Tree(s): OG_06_0017237_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038479_P002
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00264070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00030p00153440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT1G07640 OBP2 Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT2G28810 No alias Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT2G46590 DAG2 Dof-type zinc finger DNA-binding family protein 0.02 Archaeplastida
AT4G24060 No alias Dof-type zinc finger DNA-binding family protein 0.01 Archaeplastida
GSVIVT01021086001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
GSVIVT01021212001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
Gb_12877 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os02g15350.1 No alias transcription factor (DOF) 0.01 Archaeplastida
LOC_Os03g16850.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os03g60630.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os04g47990.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os05g02150.1 No alias transcription factor (DOF) 0.01 Archaeplastida
LOC_Os07g32510.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os07g48570.1 No alias transcription factor (DOF) 0.05 Archaeplastida
LOC_Os08g38220.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc03g112930.3.1 No alias transcription factor (DOF) 0.01 Archaeplastida
Solyc03g115940.4.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc05g054510.2.1 No alias transcription factor (DOF) 0.08 Archaeplastida
Solyc06g071480.3.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc06g076030.3.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc08g082910.2.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc09g010680.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc10g009360.4.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc10g086440.2.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc11g066050.1.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc11g072500.2.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e000526_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e005785_P001 No alias transcription factor (DOF) 0.01 Archaeplastida
Zm00001e006190_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e006527_P001 No alias transcription factor (DOF) 0.08 Archaeplastida
Zm00001e019172_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e023218_P004 No alias transcription factor (DOF) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003851 Znf_Dof 90 145
No external refs found!