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  5. Zm00001e038556_P001

Zm00001e038556_P001


Description : Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis thaliana (sp|q9s752|lofg2_arath : 355.0)


Gene families : OG0001224 (Archaeplastida) Phylogenetic Tree(s): OG0001224_tree ,
OG_05_0001305 (LandPlants) Phylogenetic Tree(s): OG_05_0001305_tree ,
OG_06_0001650 (SeedPlants) Phylogenetic Tree(s): OG_06_0001650_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038556_P001
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01025175001 No alias Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01025674001 No alias Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis thaliana 0.04 Archaeplastida
Solyc01g098750.3.1 No alias Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e031610_P001 No alias Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!