Zm00001e038644_P001

Description : transcription factor (HD-ZIP I/II)

Gene families : OG0000355 (Archaeplastida) Phylogenetic Tree(s): OG0000355_tree ,
OG_05_0070053 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0063993 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e038644_P001
Cluster	HCCA: Cluster_182

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00245530	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida
AMTR_s00026p00233150	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.04	Archaeplastida
AT1G70920	HB18, ATHB18	homeobox-leucine zipper protein 18	0.06	Archaeplastida
AT2G01430	ATHB17, HB17, ATHB-17	homeobox-leucine zipper protein 17	0.02	Archaeplastida
AT2G22800	HAT9	Homeobox-leucine zipper protein family	0.02	Archaeplastida
AT2G44910	HB4, ATHB-4, ATHB4	homeobox-leucine zipper protein 4	0.03	Archaeplastida
AT3G60390	HAT3	homeobox-leucine zipper protein 3	0.03	Archaeplastida
Cpa\|evm.model.tig00000203.28	No alias	No description available	0.05	Archaeplastida
GSVIVT01001366001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.1	Archaeplastida
GSVIVT01009274001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
GSVIVT01018247001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.06	Archaeplastida
LOC_Os02g05640.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
LOC_Os03g12860.1	No alias	transcription factor (HD-ZIP I/II)	0.07	Archaeplastida
LOC_Os06g04850.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
LOC_Os09g27450.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
LOC_Os10g41230.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
MA_12174g0010	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
MA_60457g0010	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
MA_860238g0010	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Mp2g24200.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Pp3c9_22420V3.1	No alias	Homeobox-leucine zipper protein family	0.03	Archaeplastida
Solyc01g073910.4.1	No alias	no hits & (original description: none)	0.1	Archaeplastida
Solyc02g063520.3.1	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
Solyc02g091930.3.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Solyc04g077220.3.1	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Solyc05g008050.3.1	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Solyc06g060830.3.1	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
Solyc08g007270.4.1	No alias	transcription factor (HD-ZIP I/II)	0.06	Archaeplastida
Zm00001e003763_P001	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Zm00001e022765_P001	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Zm00001e025216_P001	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Zm00001e036547_P001	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003106	Leu_zip_homeo	178	213
IPR001356	Homeobox_dom	122	176

External Links

No external refs found!

Zm00001e038644_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation