Zm00001e038839_P001


Description : component TIR1/AFB of auxin receptor complex. component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0000271 (Archaeplastida) Phylogenetic Tree(s): OG0000271_tree ,
OG_05_0017733 (LandPlants) Phylogenetic Tree(s): OG_05_0017733_tree ,
OG_06_0017255 (SeedPlants) Phylogenetic Tree(s): OG_06_0017255_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038839_P001
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00126140 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00029p00217840 evm_27.TU.AmTr_v1... Phytohormones.jasmonic acid.perception and signal... 0.04 Archaeplastida
AT4G03190 AFB1, ATGRH1, GRH1 GRR1-like protein 1 0.02 Archaeplastida
GSVIVT01010995001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_35123 No alias component TIR1/AFB of auxin receptor complex. component... 0.04 Archaeplastida
LOC_Os01g63420.1 No alias component COI of jasmonic acid receptor complex 0.04 Archaeplastida
LOC_Os04g32460.1 No alias component TIR1/AFB of auxin receptor complex. component... 0.07 Archaeplastida
Pp3c17_7680V3.1 No alias RNI-like superfamily protein 0.03 Archaeplastida
Pp3c23_11300V3.1 No alias auxin signaling F-box 3 0.04 Archaeplastida
Pp3c23_18960V3.1 No alias RNI-like superfamily protein 0.02 Archaeplastida
Pp3c24_9814V3.1 No alias auxin signaling F-box 3 0.03 Archaeplastida
Pp3c9_10120V3.1 No alias RNI-like superfamily protein 0.02 Archaeplastida
Smo75487 No alias Phytohormones.jasmonic acid.perception and signal... 0.02 Archaeplastida
Zm00001e008324_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.04 Archaeplastida
Zm00001e015908_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.04 Archaeplastida
Zm00001e027505_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 504 523
IPR001611 Leu-rich_rpt 313 326
No external refs found!