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  5. AT3G53750

AT3G53750 (ACT3)


Aliases : ACT3

Description : actin 3


Gene families : OG0000334 (Archaeplastida) Phylogenetic Tree(s): OG0000334_tree ,
OG_05_0000214 (LandPlants) Phylogenetic Tree(s): OG_05_0000214_tree ,
OG_06_0000153 (SeedPlants) Phylogenetic Tree(s): OG_06_0000153_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G53750
Cluster HCCA: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
AT3G46520 ACT12 actin-12 0.05 Archaeplastida
Cpa|evm.model.tig00021350.36 No alias Cytoskeleton.microfilament network.actin filament protein 0.02 Archaeplastida
GSVIVT01024980001 No alias Cytoskeleton.microfilament network.actin filament protein 0.03 Archaeplastida
Gb_08812 No alias actin filament protein 0.03 Archaeplastida
Gb_11539 No alias actin filament protein 0.03 Archaeplastida
Gb_24792 No alias actin filament protein 0.02 Archaeplastida
LOC_Os10g36650.1 No alias actin filament protein 0.02 Archaeplastida
LOC_Os12g44350.1 No alias actin filament protein 0.06 Archaeplastida
Solyc04g011500.3.1 No alias actin filament protein 0.06 Archaeplastida
Solyc05g054480.3.1 No alias actin filament protein 0.04 Archaeplastida
Solyc10g086460.2.1 No alias actin filament protein 0.05 Archaeplastida
Zm00001e004386_P001 No alias actin filament protein 0.04 Archaeplastida
Zm00001e005489_P002 No alias actin filament protein 0.02 Archaeplastida
Zm00001e027663_P005 No alias actin filament protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005200 structural constituent of cytoskeleton ISS Interproscan
CC GO:0005618 cell wall IDA Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005856 cytoskeleton TAS Interproscan
BP GO:0007010 cytoskeleton organization TAS Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
CC GO:0048046 apoplast IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000902 cell morphogenesis IEP Neighborhood
BP GO:0000904 cell morphogenesis involved in differentiation IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0004396 hexokinase activity IEP Neighborhood
MF GO:0004439 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEP Neighborhood
MF GO:0004448 isocitrate dehydrogenase activity IEP Neighborhood
MF GO:0004449 isocitrate dehydrogenase (NAD+) activity IEP Neighborhood
MF GO:0004630 phospholipase D activity IEP Neighborhood
MF GO:0004845 uracil phosphoribosyltransferase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006101 citrate metabolic process IEP Neighborhood
BP GO:0006102 isocitrate metabolic process IEP Neighborhood
BP GO:0007015 actin filament organization IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
CC GO:0009504 cell plate IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
MF GO:0009672 auxin:proton symporter activity IEP Neighborhood
BP GO:0009826 unidimensional cell growth IEP Neighborhood
BP GO:0009827 plant-type cell wall modification IEP Neighborhood
BP GO:0009830 cell wall modification involved in abscission IEP Neighborhood
BP GO:0009860 pollen tube growth IEP Neighborhood
BP GO:0009932 cell tip growth IEP Neighborhood
BP GO:0010208 pollen wall assembly IEP Neighborhood
BP GO:0010252 auxin homeostasis IEP Neighborhood
BP GO:0010315 auxin efflux IEP Neighborhood
BP GO:0010584 pollen exine formation IEP Neighborhood
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Neighborhood
BP GO:0010928 regulation of auxin mediated signaling pathway IEP Neighborhood
MF GO:0015293 symporter activity IEP Neighborhood
MF GO:0015294 solute:cation symporter activity IEP Neighborhood
MF GO:0015295 solute:proton symporter activity IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019200 carbohydrate kinase activity IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030036 actin cytoskeleton organization IEP Neighborhood
BP GO:0031329 regulation of cellular catabolic process IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0032957 inositol trisphosphate metabolic process IEP Neighborhood
BP GO:0032989 cellular component morphogenesis IEP Neighborhood
MF GO:0034593 phosphatidylinositol bisphosphate phosphatase activity IEP Neighborhood
MF GO:0034595 phosphatidylinositol phosphate 5-phosphatase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0044277 cell wall disassembly IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Neighborhood
BP GO:0046855 inositol phosphate dephosphorylation IEP Neighborhood
BP GO:0048588 developmental cell growth IEP Neighborhood
BP GO:0048589 developmental growth IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0048868 pollen tube development IEP Neighborhood
MF GO:0052866 phosphatidylinositol phosphate phosphatase activity IEP Neighborhood
BP GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Neighborhood
BP GO:0060560 developmental growth involved in morphogenesis IEP Neighborhood
BP GO:0061013 regulation of mRNA catabolic process IEP Neighborhood
BP GO:0071545 inositol phosphate catabolic process IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
MF GO:0080161 auxin transmembrane transporter activity IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:0097435 supramolecular fiber organization IEP Neighborhood
MF GO:0106019 phosphatidylinositol-4,5-bisphosphate phosphatase activity IEP Neighborhood
BP GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
BP GO:1903311 regulation of mRNA metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!