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  5. Zm00001e038964_P001

Zm00001e038964_P001


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0020360 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038964_P001
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00267100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00024p00224180 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00039p00172240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00044p00189590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00076p00157170 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00079p00140660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G34670 AtMYB93, MYB93 myb domain protein 93 0.02 Archaeplastida
AT1G73410 MYB54, ATMYB54 myb domain protein 54 0.02 Archaeplastida
AT2G31180 ATMYB14, MYB14, MYB14AT myb domain protein 14 0.04 Archaeplastida
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.02 Archaeplastida
AT3G01140 MYB106, NOK, AtMYB106 myb domain protein 106 0.02 Archaeplastida
AT3G28470 ATMYB35, TDF1 Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT3G28910 MYB30, ATMYB30 myb domain protein 30 0.03 Archaeplastida
AT3G46130 ATMYB48-1,... myb domain protein 48 0.04 Archaeplastida
AT3G47600 ATMYB94, ATMYBCP70, MYB94 myb domain protein 94 0.04 Archaeplastida
AT3G53200 AtMYB27, MYB27 myb domain protein 27 0.04 Archaeplastida
AT4G01680 MYB55, AtMYB55 myb domain protein 55 0.04 Archaeplastida
AT4G17785 MYB39 myb domain protein 39 0.03 Archaeplastida
AT4G28110 MYB41, AtMYB41 myb domain protein 41 0.03 Archaeplastida
AT4G38620 ATMYB4, MYB4 myb domain protein 4 0.03 Archaeplastida
AT5G10280 ATMYB64, ATMYB92, MYB92 myb domain protein 92 0.04 Archaeplastida
AT5G26660 MYB86, ATMYB86 myb domain protein 86 0.02 Archaeplastida
AT5G57620 MYB36, AtMYB36 myb domain protein 36 0.03 Archaeplastida
AT5G59780 ATMYB59-1,... myb domain protein 59 0.04 Archaeplastida
GSVIVT01004317001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01004851001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01008303001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01009032001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01009280001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01010006001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01013126001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01018577001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01019967001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01024353001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01025269001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028171001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028235001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01030708001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01032088001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035177001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_09986 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_27374 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g07450.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g36460.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g52410.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g02370.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g04900.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os03g19120.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g25550.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os05g04820.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g46610.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os06g10350.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g44090.3 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os07g48870.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os08g15020.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os09g36250.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os10g33810.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os12g07640.1 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_10431610g0040 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10433651g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_117992g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_12445g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_15687g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_24271g0020 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_30848g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_4783697g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_83918g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_89683g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
Mp5g14610.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp8g11870.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c15_19246V3.1 No alias myb domain protein 3r-4 0.02 Archaeplastida
Pp3c7_21220V3.1 No alias myb domain protein 105 0.02 Archaeplastida
Pp3c9_10290V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Smo84608 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc02g082040.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g086690.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g089190.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g093740.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g025870.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g119370.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g014290.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc06g065100.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc06g074910.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc08g081500.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc09g090790.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc10g008700.3.1 No alias No annotation 0.02 Archaeplastida
Solyc12g005640.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e001399_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e002893_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e003407_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e008489_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e012497_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e014925_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e015235_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e017428_P003 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e026166_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e031799_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e032298_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e035652_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e037956_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e040265_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e040384_P001 No alias transcription factor (MYB) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006541 glutamine metabolic process IEP Neighborhood
BP GO:0006542 glutamine biosynthetic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006788 heme oxidation IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0042168 heme metabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 15 62
IPR001005 SANT/Myb 68 112
No external refs found!