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  5. Zm00001e039024_P001

Zm00001e039024_P001


Description : G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000101 (LandPlants) Phylogenetic Tree(s): OG_05_0000101_tree ,
OG_06_0000391 (SeedPlants) Phylogenetic Tree(s): OG_06_0000391_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039024_P001
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00263730 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00048p00125480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G32240 KAN2 Homeodomain-like superfamily protein 0.05 Archaeplastida
AT1G69580 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT2G38300 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
AT2G40260 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
GSVIVT01007064001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01007065001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
LOC_Os08g06370.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os08g33750.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os11g01480.1 No alias Putative Myb family transcription factor At1g14600... 0.01 Archaeplastida
LOC_Os12g01490.1 No alias Putative Myb family transcription factor At1g14600... 0.01 Archaeplastida
Pp3c13_9170V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c1_41530V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c20_7050V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c23_19680V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c3_10940V3.1 No alias myb-like HTH transcriptional regulator family protein 0.01 Archaeplastida
Smo405704 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc02g080740.3.1 No alias G2-like GARP transcription factor 0.01 Archaeplastida
Zm00001e004125_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e005097_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e007231_P002 No alias Putative Myb family transcription factor At1g14600... 0.07 Archaeplastida
Zm00001e013758_P003 No alias G2-like GARP transcription factor 0.01 Archaeplastida
Zm00001e015547_P002 No alias Myb-related protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e035893_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e037731_P001 No alias G2-like GARP transcription factor 0.01 Archaeplastida
Zm00001e041868_P002 No alias G2-like GARP transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 26 76
No external refs found!