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  5. Zm00001e039133_P001

Zm00001e039133_P001


Description : Protein TORNADO 2 OS=Arabidopsis thaliana (sp|q9fiq5|trn2_arath : 209.0)


Gene families : OG0000259 (Archaeplastida) Phylogenetic Tree(s): OG0000259_tree ,
OG_05_0000226 (LandPlants) Phylogenetic Tree(s): OG_05_0000226_tree ,
OG_06_0000242 (SeedPlants) Phylogenetic Tree(s): OG_06_0000242_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039133_P001
Cluster HCCA: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00124120 evm_27.TU.AmTr_v1... Tetraspanin-2 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00108p00058320 evm_27.TU.AmTr_v1... Tetraspanin-6 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G18520 TET11 tetraspanin11 0.03 Archaeplastida
AT2G23810 TET8 tetraspanin8 0.03 Archaeplastida
AT3G12090 TET6 tetraspanin6 0.02 Archaeplastida
AT4G23410 TET5 tetraspanin5 0.06 Archaeplastida
Gb_00679 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_26509 No alias Protein TORNADO 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os05g03530.1 No alias Tetraspanin-6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os06g37510.1 No alias Tetraspanin-2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_24323g0010 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_909581g0010 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c21_1270V3.1 No alias tetraspanin8 0.03 Archaeplastida
Pp3c4_3550V3.1 No alias tetraspanin10 0.03 Archaeplastida
Pp3c7_23740V3.1 No alias tetraspanin8 0.02 Archaeplastida
Smo231326 No alias Tetraspanin-3 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo405777 No alias Tetraspanin-8 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc03g059390.3.1 No alias Tetraspanin-2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc04g049080.4.1 No alias Tetraspanin-5 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc07g006280.3.1 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e004417_P001 No alias Tetraspanin-10 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 8 245
No external refs found!