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  5. Zm00001e039187_P001

Zm00001e039187_P001


Description : Suppressor of mec-8 and unc-52 protein homolog 2 OS=Arabidopsis thaliana (sp|o48713|smu2_arath : 534.0)


Gene families : OG0005545 (Archaeplastida) Phylogenetic Tree(s): OG0005545_tree ,
OG_05_0005325 (LandPlants) Phylogenetic Tree(s): OG_05_0005325_tree ,
OG_06_0007615 (SeedPlants) Phylogenetic Tree(s): OG_06_0007615_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039187_P001
Cluster HCCA: Cluster_270

Target Alias Description ECC score Gene Family Method Actions
Cre16.g688750 No alias Suppressor of mec-8 and unc-52 protein homolog 2... 0.02 Archaeplastida
GSVIVT01015011001 No alias Suppressor of mec-8 and unc-52 protein homolog 2... 0.02 Archaeplastida
Mp5g17010.1 No alias Suppressor of mec-8 and unc-52 protein homolog 2... 0.03 Archaeplastida
Smo122486 No alias Suppressor of mec-8 and unc-52 protein homolog 2... 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR012916 RED_N 5 221
IPR012492 RED_C 443 549
No external refs found!